ESPDHot: An Effective Machine Learning-Based Approach for Predicting Protein–DNA Interaction Hotspots
L Tao, T Zhou, Z Wu, F Hu, S Yang… - Journal of Chemical …, 2024 - ACS Publications
Protein–DNA interactions are pivotal to various cellular processes. Precise identification of
the hotspot residues for protein–DNA interactions holds great significance for revealing the …
the hotspot residues for protein–DNA interactions holds great significance for revealing the …
Insights into Activation Dynamics and Functional Sites of Inwardly Rectifying Potassium Channel Kir3. 2 by an Elastic Network Model Combined with Perturbation …
Y Zhao, X Zhang, L Liu, F Hu, F Chang… - The Journal of …, 2024 - ACS Publications
The inwardly rectifying potassium channel Kir3. 2, a member of the inward rectifier
potassium (Kir) channel family, exerts important biological functions through transporting …
potassium (Kir) channel family, exerts important biological functions through transporting …
[HTML][HTML] Bayesian network models identify cooperative GPCR: G protein interactions that contribute to G protein coupling
E Mukhaleva, N Ma, WJC Van Der Velden… - Journal of Biological …, 2024 - ASBMB
Cooperative interactions in protein-protein interfaces demonstrate the interdependency or
the linked network-like behavior and their effect on the coupling of proteins. Cooperative …
the linked network-like behavior and their effect on the coupling of proteins. Cooperative …
Study of the Allosteric Mechanism of Human Mitochondrial Phenylalanyl-tRNA Synthetase by Transfer Entropy via an Improved Gaussian Network Model and Co …
Z Han, X Wang, Z Wu, C Li - The Journal of Physical Chemistry …, 2023 - ACS Publications
We propose an improved transfer entropy approach called the dynamic version of the force
constant fitted Gaussian network model based on molecular dynamics ensemble …
constant fitted Gaussian network model based on molecular dynamics ensemble …
Celebrating Diversity, Equity, Inclusion, and Respect in Computational and Theoretical Chemistry
In sync with advancing the ACS'Core Value of Diversity, Equity, Inclusion, and Respect
(DEIR) and following the overwhelming response and impact of JCIM's special issue on …
(DEIR) and following the overwhelming response and impact of JCIM's special issue on …