BEAST 2.5: An advanced software platform for Bayesian evolutionary analysis

R Bouckaert, TG Vaughan… - PLoS computational …, 2019 - journals.plos.org
Elaboration of Bayesian phylogenetic inference methods has continued at pace in recent
years with major new advances in nearly all aspects of the joint modelling of evolutionary …

Towards large-scale integrative taxonomy (LIT): resolving the data conundrum for dark taxa

E Hartop, A Srivathsan, F Ronquist… - Systematic Biology, 2022 - academic.oup.com
Abstract New, rapid, accurate, scalable, and cost-effective species discovery and
delimitation methods are needed for tackling “dark taxa,” here defined as groups for which …

Museomics of tree squirrels: a dense taxon sampling of mitogenomes reveals hidden diversity, phenotypic convergence, and the need of a taxonomic overhaul

EF de Abreu-Jr, SE Pavan, MTN Tsuchiya… - BMC evolutionary …, 2020 - Springer
Abstract Background Tree squirrels (Sciuridae, Sciurini), in particular the highly diverse
Neotropical lineages, are amongst the most rapidly diversifying branches of the mammal …

Milnesium tardigradum Doyère, 1840: The first integrative study of interpopulation variability in a tardigrade species

W Morek, D Stec, P Gąsiorek… - Journal of Zoological …, 2019 - Wiley Online Library
Intraspecific variability of tardigrades is a poorly investigated field. The great majority of
tardigrade species were described using single populations, sometimes even single …

A new species group from the Daphnia curvirostris species complex (Cladocera: Anomopoda) from the eastern Palaearctic: taxonomy, phylogeny and …

AA Kotov, PG Garibian, EI Bekker… - Zoological journal of …, 2021 - academic.oup.com
The eastern Palaearctic is a centre of diversity for freshwater cladocerans (Crustacea), but
little is known about the evolution and taxonomy of this diversity. Daphnia curvirostris is a …

New insights into the genetic diversity of the stone crayfish: taxonomic and conservation implications

L Lovrenčić, L Bonassin, LL Boštjančić… - BMC Evolutionary …, 2020 - Springer
Background Austropotamobius torrentium is a freshwater crayfish species native to central
and south-eastern Europe, with an intricate evolutionary history and the highest genetic …

[HTML][HTML] Proposed taxonomic revision of Giardia duodenalis

C Wielinga, A Williams, P Monis… - Infection, Genetics and …, 2023 - Elsevier
Abstract Giardia duodenalis, Giardia enterica, Giardia intestinalis and Giardia lamblia are
the synonyms for a species complex of 8–11 phylogenetically distinct species of Giardia …

[HTML][HTML] Evolutionary units delimitation and continental multilocus phylogeny of the hyperdiverse catfish genus Hypostomus

LJ de Queiroz, Y Cardoso, C Jacot-des-Combes… - Molecular phylogenetics …, 2020 - Elsevier
With 149 currently recognized species, Hypostomus is one of the most species-rich catfish
genera in the world, widely distributed over most of the Neotropical region. To clarify the …

Unexpected mitochondrial lineage diversity within the genus Alonella Sars, 1862 (Crustacea: Cladocera) across the Northern Hemisphere

AN Neretina, DP Karabanov, V Sacherova, AA Kotov - PeerJ, 2021 - peerj.com
Representatives of the genus Alonella Sars (Crustacea: Cladocera: Chydorinae) belong to
the smallest known water fleas. Although species of Alonella are widely distributed and often …

Evidence for cryptic diversification in a rupicolous forest-dwelling gecko (Gekkonidae: Afroedura pondolia) from a biodiversity hotspot

T Busschau, W Conradie, SR Daniels - Molecular Phylogenetics and …, 2019 - Elsevier
We assess the phylogeographic structure and test several species delimitation methods in
the forest-living Pondo flat-gecko, Afroedura pondolia, by sampling specimens from across …