The A–Z of bacterial translation inhibitors

DN Wilson - Critical reviews in biochemistry and molecular biology, 2009 - Taylor & Francis
Protein synthesis is one of the major targets in the cell for antibiotics. This review endeavors
to provide a comprehensive “post-ribosome structure” A–Z of the huge diversity of antibiotics …

Translating the genome in time and space: specialized ribosomes, RNA regulons, and RNA-binding proteins

Z Shi, M Barna - Annual review of cell and developmental …, 2015 - annualreviews.org
A central question in cell and developmental biology is how the information encoded in the
genome is differentially interpreted to generate a diverse array of cell types. A growing body …

Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis

T Cortes, OT Schubert, G Rose, KB Arnvig, I Comas… - Cell reports, 2013 - cell.com
Deciphering physiological changes that mediate transition of Mycobacterium tuberculosis
between replicating and nonreplicating states is essential to understanding how the …

Selective translation of leaderless mRNAs by specialized ribosomes generated by MazF in Escherichia coli

O Vesper, S Amitai, M Belitsky, K Byrgazov… - Cell, 2011 - cell.com
Escherichia coli (E. coli) mazEF is a stress-induced toxin-antitoxin (TA) module. The toxin
MazF is an endoribonuclease that cleaves single-stranded mRNAs at ACA sequences …

Operon mRNAs are organized into ORF-centric structures that predict translation efficiency

DH Burkhardt, S Rouskin, Y Zhang, GW Li… - Elife, 2017 - elifesciences.org
Bacterial mRNAs are organized into operons consisting of discrete open reading frames
(ORFs) in a single polycistronic mRNA. Individual ORFs on the mRNA are differentially …

Escherichia coli Ribosomal Protein S1 Unfolds Structured mRNAs Onto the Ribosome for Active Translation Initiation

M Duval, A Korepanov, O Fuchsbauer, P Fechter… - PLoS …, 2013 - journals.plos.org
Regulation of translation initiation is well appropriate to adapt cell growth in response to
stress and environmental changes. Many bacterial mRNAs adopt structures in their 5 …

Genome-wide identification of transcriptional start sites in the haloarchaeon Haloferax volcanii based on differential RNA-Seq (dRNA-Seq)

J Babski, KA Haas, D Näther-Schindler, F Pfeiffer… - BMC genomics, 2016 - Springer
Abstract Background Differential RNA-Seq (dRNA-Seq) is a recently developed method of
performing primary transcriptome analyses that allows for the genome-wide mapping of …

Contrasting silver nanoparticle toxicity and detoxification strategies in Microcystis aeruginosa and Chlorella vulgaris: New insights from proteomic and physiological …

H Qian, K Zhu, H Lu, M Lavoie, S Chen, Z Zhou… - Science of the Total …, 2016 - Elsevier
Several studies have shown that AgNPs can be toxic to phytoplankton, but the underlying
cellular mechanisms still remain largely unknown. Here we studied the toxicity and …

Conserved bacterial RNase YbeY plays key roles in 70S ribosome quality control and 16S rRNA maturation

AI Jacob, C Köhrer, BW Davies, UL RajBhandary… - Molecular cell, 2013 - cell.com
Quality control of ribosomes is critical for cellular function since protein mistranslation leads
to severe physiological consequences. We report evidence of a previously unrecognized …

Kinetic control of translation initiation in bacteria

P Milón, MV Rodnina - Critical reviews in biochemistry and …, 2012 - Taylor & Francis
Translation initiation is a crucial step of protein synthesis which largely defines how the
composition of the cellular transcriptome is converted to the proteome and controls the …