Protein interaction networks display approximate scale-free topology, in which hub proteins
that interact with a large number of other proteins determine the overall organization of the …

Network theory has become one of the most visible theoretical frameworks that can be
applied to the description, analysis, understanding, design and repair of multi-level complex …

The rapid accumulation of knowledge and the recent emergence of new dynamic and
practically unmoderated information repositories have rendered the classical concept of the …

Network motifs are small connected sub-graphs occurring at significantly higher frequencies
in a given graph compared with random graphs of similar degree distribution. Recently …

In the process of many real networks' growth, each new node joins a few existing nodes, the
number of which is unknown in advance. However, classical network growth models …

Although intrinsically disordered proteins are prevalent and functionally important, it has
never been asked whether structural disorder should be considered as a separate structural …

Background The reconstruction of genetic regulatory networks from microarray gene
expression data has been a challenging task in bioinformatics. Various approaches to this …

Background The regulatory interactions between transcription factors (TF) and regulated
genes (RG) in a species genome can be lumped together in a single directed graph. The …

Many empirical studies have shown that in social, citation, collaboration, and other types of
networks in real world, the degree of almost every node is less than the average degree of …

We study the evolvability and dynamics of artificial genetic regulatory networks (GRNs), as
active control systems, realizing simple models of biological clocks that have evolved to …