Synthetic mRNA capping

F Muttach, N Muthmann… - Beilstein journal of …, 2017 - beilstein-journals.org
Eukaryotic mRNA with its 5′-cap is of central importance for the cell. Many studies involving
mRNA require reliable preparation and modification of 5′-capped RNAs. Depending on the …

NAD-capped RNAs–a redox cofactor meets RNA

M Wolfram-Schauerte, K Höfer - Trends in Biochemical Sciences, 2023 - cell.com
RNA modifications immensely expand the diversity of the transcriptome, thereby influencing
the function, localization, and stability of RNA. One prominent example of an RNA …

Structure and function of the bacterial decapping enzyme NudC

K Höfer, S Li, F Abele, J Frindert, J Schlotthauer… - Nature chemical …, 2016 - nature.com
RNA capping and decapping are thought to be distinctive features of eukaryotes. The redox
cofactor NAD was recently discovered to be attached to small regulatory RNAs in bacteria in …

Capture and sequencing of NAD-capped RNA sequences with NAD captureSeq

ML Winz, H Cahová, G Nübel, J Frindert, K Höfer… - Nature protocols, 2017 - nature.com
Here we describe a protocol for NAD captureSeq that allows for the identification of
nicotinamide-adenine dinucleotide (NAD)-capped RNA sequences in total RNA samples …

Identification and in vitro characterization of UDP-GlcNAc-RNA cap-modifying and decapping enzymes

F Weber, NA Motzkus, L Brandl, M Möhler… - Nucleic Acids …, 2024 - academic.oup.com
In recent years, several noncanonical RNA caps derived from cofactors and metabolites
have been identified. Purine-containing RNA caps have been extensively studied, with …

Applications of phosphate modification and labeling to study (m) RNA caps

M Warminski, PJ Sikorski, J Kowalska… - Phosphate Labeling and …, 2017 - Springer
The cap is a natural modification present at the 5'ends of eukaryotic messenger RNA
(mRNA), which because of its unique structural features, mediates essential biological …

Epitranscriptomics: RNA modifications in bacteria and archaea

K Höfer, A Jäschke - Regulating with RNA in Bacteria and …, 2018 - Wiley Online Library
Today, RNA is no longer seen as a mere intermediary, transferring information from genes to
proteins. It has become more and more obvious that RNA plays additional biological roles in …

A viral ADP-ribosyltransferase attaches RNA chains to host proteins

M Wolfram-Schauerte, N Pozhydaieva, J Grawenhoff… - Nature, 2023 - nature.com
The mechanisms by which viruses hijack the genetic machinery of the cells they infect are of
current interest. When bacteriophage T4 infects Escherichia coli, it uses three different …

Boronate affinity electrophoresis for the purification and analysis of cofactor-modified RNAs

G Nübel, FA Sorgenfrei, A Jäschke - Methods, 2017 - Elsevier
RNA modifications are widely distributed in Nature, and their thorough analysis helps
answering fundamental biological questions. Nowadays, mass spectrometry or deep …

[HTML][HTML] Nicotinamide riboside: What it takes to incorporate it into RNA

F Wenzek, A Biallas, S Müller - Molecules, 2024 - mdpi.com
Nicotinamide is an important functional compound and, in the form of nicotinamide adenine
dinucleotide (NAD), is used as a co-factor by protein-based enzymes to catalyze redox …