[HTML][HTML] Controlling the human microbiome

YY Liu - Cell systems, 2023 - cell.com
We coexist with a vast number of microbes that live in and on our bodies. Those microbes
and their genes are collectively known as the human microbiome, which plays important …

The demise of large tropical brachiopods and the Mesozoic marine revolution

EM Harper, LS Peck - Royal Society Open Science, 2024 - royalsocietypublishing.org
Changes in predator–prey interactions are often implicated as drivers of major evolutionary
change. A prominent example is the dramatic changes in shallow marine assemblages …

Making the competitive exclusion principle operational at the biogeographical scale using fuzzy logic

R Real, JC Báez, JE Fa, J Olivero… - Frontiers in Ecology and …, 2022 - frontiersin.org
In biogeography the competitive exclusion principle (CEP) has been confirmed in some
cases but not in others. This has fueled an unresolved debate between those advocating …

Biotechnology of virus eradication and plant vaccination in phytobiome context

V Oberemok, K Laikova, I Golovkin, L Kryukov… - Plant …, 2022 - Wiley Online Library
A plant's associated biota plays an integral role in its metabolism, nutrient uptake, stress
tolerance, pathogen resistance and other physiological processes. Although a virome is an …

Siderophore-mediated iron partition promotes dynamical coexistence between cooperators and cheaters

J Shao, N Rong, Z Wu, S Gu, B Liu, N Shen, Z Li - Iscience, 2023 - cell.com
Microbes shape their habitats by consuming resources and producing a diverse array of
chemicals that can serve as public goods. Despite the risk of exploitation by cheaters, genes …

Self-organized biodiversity in biotic resource systems through pairwise encounters

J Kang, S Zhang, Y Niu, F Zhong, X Wang - Chaos, Solitons & Fractals, 2024 - Elsevier
A central issue in ecology is understanding what determines biodiversity in nature,
particularly in biotic resource systems that typically lack cross-feeding. In this study, we …

A past–present–future lens of environmental change: blending applied paleoecology and participatory system dynamics modeling at a conservation site in the Cape …

CJ Forbes, J Clifford-Holmes, L Gillson - Frontiers in Conservation …, 2024 - frontiersin.org
Landscapes are social–ecological systems (SESs) that produce ecosystem services, which
change over time in response to environmental, biotic, and social drivers. Failure to consider …

Stable States of a Microbial Community Are Formed by Dynamic Metabolic Networks with Members Functioning to Achieve Both Robustness and Plasticity

M Honjo, K Suzuki, J Katai, Y Tashiro… - Microbes and …, 2024 - jstage.jst.go.jp
A more detailed understanding of the mechanisms underlying the formation of microbial
communities is essential for the efficient management of microbial ecosystems. The stable …

Siderophore Piracy Promotes Dynamical Coexistence in Microbial Community

J Shao, Y Li, J Lu, S Gu, Z Li - bioRxiv, 2023 - biorxiv.org
The game between cooperation and cheating in the microbial world is captivating. Microbes
that acquire essential iron through the secretion of siderophores face the public good …

Intraspecific predator interference promotes biodiversity in ecosystems

J Kang, S Zhang, Y Niu, F Zhong, X Wang - eLife, 2024 - elifesciences.org
Explaining biodiversity is a fundamental issue in ecology. A long-standing puzzle lies in the
paradox of the plankton: many species of plankton feeding on a limited variety of resources …