Structure and dynamics of molecular networks: a novel paradigm of drug discovery: a comprehensive review

P Csermely, T Korcsmáros, HJM Kiss, G London… - Pharmacology & …, 2013 - Elsevier
Despite considerable progress in genome-and proteome-based high-throughput screening
methods and in rational drug design, the increase in approved drugs in the past decade did …

Network-based drug repositioning

Z Wu, Y Wang, L Chen - Molecular BioSystems, 2013 - pubs.rsc.org
Network-based computational biology, with the emphasis on biomolecular interactions and
omics-data integration, has had success in drug development and created new directions …

Predicting therapeutic drugs for hepatocellular carcinoma based on tissue-specific pathways

L Yu, M Wang, Y Yang, F Xu, X Zhang… - PLoS Computational …, 2021 - journals.plos.org
Hepatocellular carcinoma (HCC) is a significant health problem worldwide with poor
prognosis. Drug repositioning represents a profitable strategy to accelerate drug discovery …

Construction of drug network based on side effects and its application for drug repositioning

H Ye, Q Liu, J Wei - PloS one, 2014 - journals.plos.org
Drugs with similar side-effect profiles may share similar therapeutic properties through
related mechanisms of action. In this study, a drug-drug network was constructed based on …

Inferring drug-disease associations based on known protein complexes

L Yu, J Huang, Z Ma, J Zhang, Y Zou, L Gao - BMC medical genomics, 2015 - Springer
Inferring drug-disease associations is critical in unveiling disease mechanisms, as well as
discovering novel functions of available drugs, or drug repositioning. Previous work is …

Drug repositioning through network pharmacology

H Ye, J Wei, K Tang, R Feuers… - Current topics in …, 2016 - ingentaconnect.com
Low drug productivity has been a significant problem of the pharmaceutical industry for
several decades even though numerous novel technologies were introduced during this …

Network‐Based Inference Methods for Drug Repositioning

H Chen, H Zhang, Z Zhang, Y Cao… - … methods in medicine, 2015 - Wiley Online Library
Mining potential drug‐disease associations can speed up drug repositioning for
pharmaceutical companies. Previous computational strategies focused on prior biological …

Inferring drug-disease associations from integration of chemical, genomic and phenotype data using network propagation

YF Huang, HY Yeh, VW Soo - BMC medical genomics, 2013 - Springer
Background During the last few years, the knowledge of drug, disease phenotype and
protein has been rapidly accumulated and more and more scientists have been drawn the …

Exploring the pharmacogenomics knowledge base (PharmGKB) for repositioning breast cancer drugs by leveraging Web ontology language (OWL) and …

Q Zhu, CUI Tao, F Shen, CG Chute - Biocomputing 2014, 2014 - World Scientific
Computational drug repositioning leverages computational technology and high volume of
biomedical data to identify new indications for existing drugs. Since it does not require costly …

Identification of novel immune‐relevant drug target genes for Alzheimer's disease by combining ontology inference with network analysis

ZJ Han, WW Xue, L Tao, F Zhu - CNS neuroscience & …, 2018 - Wiley Online Library
Aims Alzheimer's disease (AD) is one of the leading causes of death in elderly people. Its
pathogenesis is greatly associated with the abnormality of immune system. However, only a …