Infrared difference spectroscopy of proteins: from bands to bonds

VA Lorenz-Fonfria - Chemical reviews, 2020 - ACS Publications
Infrared difference spectroscopy probes vibrational changes of proteins upon their
perturbation. Compared with other spectroscopic methods, it stands out by its sensitivity to …

New insight into phytochromes: connecting structure to function

J Hughes, A Winkler - Annual review of plant biology, 2024 - annualreviews.org
Red and far-red light–sensing phytochromes are widespread in nature, occurring in plants,
algae, fungi, and prokaryotes. Despite at least a billion years of evolution, their photosensory …

The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser

E Claesson, WY Wahlgren, H Takala, S Pandey… - Elife, 2020 - elifesciences.org
Phytochrome proteins control the growth, reproduction, and photosynthesis of plants, fungi,
and bacteria. Light is detected by a bilin cofactor, but it remains elusive how this leads to …

Protein control of photochemistry and transient intermediates in phytochromes

G Salvadori, V Macaluso, G Pellicci, L Cupellini… - Nature …, 2022 - nature.com
Phytochromes are ubiquitous photoreceptors responsible for sensing light in plants, fungi
and bacteria. Their photoactivation is initiated by the photoisomerization of the embedded …

Photoactivation mechanism, timing of protein secondary structure dynamics and carotenoid translocation in the orange carotenoid protein

PE Konold, IHM Van Stokkum… - Journal of the …, 2018 - ACS Publications
The orange carotenoid protein (OCP) is a two-domain photoactive protein that noncovalently
binds an echinenone (ECN) carotenoid and mediates photoprotection in cyanobacteria. In …

Vibrational couplings between protein and cofactor in bacterial phytochrome Agp1 revealed by 2D-IR spectroscopy

D Buhrke, N Michael, P Hamm - Proceedings of the …, 2022 - National Acad Sciences
Phytochromes are ubiquitous photoreceptor proteins that undergo a significant refolding of
secondary structure in response to initial photoisomerization of the chromophoric group …

Tips and turns of bacteriophytochrome photoactivation

H Takala, P Edlund, JA Ihalainen… - Photochemical & …, 2020 - pubs.rsc.org
Phytochromes are ubiquitous photosensor proteins, which control the growth, reproduction
and movement in plants, fungi and bacteria. Phytochromes switch between two …

Ultrafast proton-coupled isomerization in the phototransformation of phytochrome

Y Yang, T Stensitzki, L Sauthof, A Schmidt… - Nature Chemistry, 2022 - nature.com
The biological function of phytochromes is triggered by an ultrafast photoisomerization of the
tetrapyrrole chromophore biliverdin between two rings denoted C and D. The mechanism by …

Bacteriophytochromes–from informative model systems of phytochrome function to powerful tools in cell biology

G Gourinchas, S Etzl, A Winkler - Current opinion in structural biology, 2019 - Elsevier
Highlights•Fluorescent probes or optogenetic tools can be developed using phytochrome
modules.•Bacteriophytochromes provide advantageous properties in protein engineering …

[HTML][HTML] Ground-state heterogeneity and vibrational energy redistribution in bacterial phytochrome observed with femtosecond 2D IR spectroscopy

M Chenchiliyan, J Kübel, SA Ooi, G Salvadori… - The Journal of …, 2023 - pubs.aip.org
Phytochromes belong to a group of photoreceptor proteins containing a covalently bound
biliverdin chromophore that inter-converts between two isomeric forms upon photoexcitation …