Characterizing protein–protein interactions using mass spectrometry: challenges and opportunities

AH Smits, M Vermeulen - Trends in biotechnology, 2016 - cell.com
During the past decades, mass spectrometry (MS)-based proteomics has become an
important technology to identify protein–protein interactions (PPIs). The application of a …

Recent advances in charting protein–protein interaction: mass spectrometry-based approaches

AC Gavin, K Maeda, S Kühner - Current opinion in biotechnology, 2011 - Elsevier
Cellular functions are the result of the coordinated action of groups of proteins interacting in
molecular assemblies or pathways. The systematic and unbiased charting of protein–protein …

[HTML][HTML] A protein complex network of Drosophila melanogaster

KG Guruharsha, JF Rual, B Zhai, J Mintseris, P Vaidya… - Cell, 2011 - cell.com
Determining the composition of protein complexes is an essential step toward
understanding the cell as an integrated system. Using coaffinity purification coupled to mass …

The HSPGs Syndecan and Dallylike bind the receptor phosphatase LAR and exert distinct effects on synaptic development

KG Johnson, AP Tenney, A Ghose, AM Duckworth… - Neuron, 2006 - cell.com
The formation and plasticity of synaptic connections rely on regulatory interactions between
pre-and postsynaptic cells. We show that the Drosophila heparan sulfate proteoglycans …

elipsa is an early determinant of ciliogenesis that links the IFT particle to membrane-associated small GTPase Rab8

Y Omori, C Zhao, A Saras, S Mukhopadhyay, W Kim… - Nature cell …, 2008 - nature.com
The formation and function of cilia involves the movement of intraflagellar transport (IFT)
particles underneath the ciliary membrane, along axonemal microtubules,. Although this …

Regulation of Notch signalling by non-visual β-arrestin

A Mukherjee, A Veraksa, A Bauer, C Rosse… - Nature cell …, 2005 - nature.com
Signalling activity of the Notch receptor, which plays a fundamental role in metazoan cell
fate determination, is controlled at multiple levels. We uncovered a Notch signal-controlling …

Identification of new protein interactions between dengue fever virus and its hosts, human and mosquito

D Mairiang, H Zhang, A Sodja, T Murali, P Suriyaphol… - PloS one, 2013 - journals.plos.org
The four divergent serotypes of dengue virus are the causative agents of dengue fever,
dengue hemorrhagic fever and dengue shock syndrome. About two-fifths of the world's …

Drosophila HOPS and AP-3 complex genes are required for a Deltex-regulated activation of notch in the endosomal trafficking pathway

M Wilkin, P Tongngok, N Gensch, S Clemence… - Developmental cell, 2008 - cell.com
DSL ligands promote proteolysis of the Notch receptor, to release active Notch intracellular
domain (N ICD). Conversely, the E3 ubiquitin ligase Deltex can activate ligand-independent …

The tandem affinity purification method: an efficient system for protein complex purification and protein interaction identification

X Xu, Y Song, Y Li, J Chang, L An - Protein expression and purification, 2010 - Elsevier
Isolation and identification of protein partners in multi-protein complexes are important in
gaining further insights into the cellular roles of proteins and determining the possible …

Protein–protein interactions in dilute to concentrated solutions: α-Chymotrypsinogen in acidic conditions

MA Blanco, T Perevozchikova… - The journal of …, 2014 - ACS Publications
Protein–protein interactions were investigated for α-chymotrypsinogen by static and dynamic
light scattering (SLS and DLS, respectively), as well as small-angle neutron scattering …