Prediction of ATP-binding sites in membrane proteins using a two-dimensional convolutional neural network

RMI Kusuma, YY Ou - Journal of Molecular Graphics and Modelling, 2019 - Elsevier
Membrane proteins, the most important drug targets, account for around 30% of total
proteins encoded by the genome of living organisms. An important role of these proteins is …

DeepEfflux: a 2D convolutional neural network model for identifying families of efflux proteins in transporters

SW Taju, TTD Nguyen, NQK Le, RMI Kusuma… - …, 2018 - academic.oup.com
Motivation Efflux protein plays a key role in pumping xenobiotics out of the cells. The
prediction of efflux family proteins involved in transport process of compounds is crucial for …

DeepPLM_mCNN: An approach for enhancing ion channel and ion transporter recognition by multi-window CNN based on features from pre-trained language models

VT Le, MS Malik, YH Tseng, YC Lee, CI Huang… - … Biology and Chemistry, 2024 - Elsevier
Accurate classification of membrane proteins like ion channels and transporters is critical for
elucidating cellular processes and drug development. We present DeepPLM_mCNN, a …

Identification of efflux proteins based on contextual representations with deep bidirectional transformer encoders

SW Taju, SMA Shah, YY Ou - Analytical biochemistry, 2021 - Elsevier
Efflux proteins are the transport proteins expressed in the plasma membrane, which are
involved in the movement of unwanted toxic substances through specific efflux pumps …

Deep Learning Solutions for Protein: Recent Development and Future Directions

H Chiroma, AM Usman, F Jauro, LA Gabralla… - … and Technologies for …, 2021 - Springer
The prediction of protein structure has a major role in drugs design and network
pharmacology. However, complexity of the protein structure, time consumption and …

[PDF][PDF] Reconocimiento de dıgitos escritos a mano usando aprendizaje profundo

L Jiménez, J Fonseca-Solıs - academia.edu
En este documento se compara el rendimiento de dos disenos de redes neuronales
convolucionales para clasificar dıgitos escritos a mano. Este problema permite explorar …

[引用][C] Deep Learning Solutions for Protein Structure: Survey, Challenges and Future Prospects

H Chiroma, AM Usman, KS Adewole, F Shittu, AY Umar… - Proteins