Chemometric methods in data processing of mass spectrometry-based metabolomics: A review

L Yi, N Dong, Y Yun, B Deng, D Ren, S Liu… - Analytica chimica acta, 2016 - Elsevier
This review focuses on recent and potential advances in chemometric methods in relation to
data processing in metabolomics, especially for data generated from mass spectrometric …

Recent trends in application of chemometric methods for GC-MS and GCŨGC-MS-based metabolomic studies

N Feizi, FS Hashemi-Nasab, F Golpelichi… - TrAC Trends in …, 2021 - Elsevier
Metabolomics is the science of studying small molecules (metabolites) in biological systems
with the aim of getting insight into cells, biofluids and organisms. Chemometric methods are …

The Chemistry Development Kit (CDK) v2. 0: atom typing, depiction, molecular formulas, and substructure searching

EL Willighagen, JW Mayfield, J Alvarsson… - Journal of …, 2017 - Springer
Abstract Background The Chemistry Development Kit (CDK) is a widely used open source
cheminformatics toolkit, providing data structures to represent chemical concepts along with …

MSNovelist: de novo structure generation from mass spectra

MA Stravs, K Dührkop, S Böcker, N Zamboni - Nature Methods, 2022 - nature.com
Current methods for structure elucidation of small molecules rely on finding similarity with
spectra of known compounds, but do not predict structures de novo for unknown compound …

Identification and structure elucidation by NMR spectroscopy

M Elyashberg - TrAC Trends in Analytical Chemistry, 2015 - Elsevier
The state of the art and recent developments in application of nuclear magnetic resonance
(NMR) for structure elucidation and identification of small organic molecules are discussed …

Computational mass spectrometry for small molecules

K Scheubert, F Hufsky, S Böcker - Journal of cheminformatics, 2013 - Springer
The identification of small molecules from mass spectrometry (MS) data remains a major
challenge in the interpretation of MS data. This review covers the computational aspects of …

[HTML][HTML] Open source molecular modeling

S Pirhadi, J Sunseri, DR Koes - Journal of Molecular Graphics and …, 2016 - Elsevier
The success of molecular modeling and computational chemistry efforts are, by definition,
dependent on quality software applications. Open source software development provides …

[HTML][HTML] Randić index and information

I Gutman, B Furtula, V Katanić - AKCE International Journal of Graphs and …, 2018 - Elsevier
The Randić index RG is one of the classical graph-based molecular structure descriptors
that found countless applications in chemistry and pharmacology. The mathematical …

Exhaustive product analysis of three benzene discharges by microwave spectroscopy

MC McCarthy, KLK Lee, PB Carroll… - The Journal of …, 2020 - ACS Publications
Using chirped and cavity microwave spectroscopies, automated double resonance, new
high-speed fitting and deep learning algorithms, and large databases of computed …

[HTML][HTML] Safe and sustainable by design: A computer-based approach to redesign chemicals for reduced environmental hazards

J van Dijk, H Flerlage, S Beijer, JC Slootweg… - Chemosphere, 2022 - Elsevier
Persistency of chemicals in the environment is seen a pressing issue as it results in
accumulation of chemicals over time. Persistent chemicals can be an asset in a well …