[HTML][HTML] What do mathematical models tell us about killing rates during HIV-1 infection?

S Gadhamsetty, JB Beltman, RJ De Boer - Immunology letters, 2015 - Elsevier
Over the past few decades the extent to which cytotoxic T lymphocytes (CTLs) control human
immunodeficiency virus (HIV) replication has been studied extensively, yet their role and …

Patterns and rates of viral evolution in HIV-1 subtype B infected females and males

MJ Dapp, KM Kober, L Chen, DH Westfall, K Wong… - PloS one, 2017 - journals.plos.org
Biological sex differences affect the course of HIV infection, with untreated women having
lower viral loads compared to their male counterparts but, for a given viral load, women have …

Transmission of multiple HIV-1 subtype C transmitted/founder viruses into the same recipients was not determined by modest phenotypic differences

H Song, B Hora, EE Giorgi, A Kumar, F Cai… - Scientific reports, 2016 - nature.com
A severe bottleneck exists during HIV-1 mucosal transmission. However, viral properties that
determine HIV-1 transmissibility are not fully elucidated. We identified multiple …

Preexisting compensatory amino acids compromise fitness costs of a HIV-1 T cell escape mutation

D Liu, T Zuo, B Hora, H Song, W Kong, X Yu… - Retrovirology, 2014 - Springer
Background Fitness costs and slower disease progression are associated with a cytolytic T
lymphocyte (CTL) escape mutation T242N in Gag in HIV-1-infected individuals carrying HLA …

Accumulated mutations by 6 months of infection collectively render transmitted/founder HIV-1 significantly less fit

C Wang, D Liu, T Zuo, B Hora, F Cai, H Ding… - Journal of Infection, 2020 - Elsevier
Objective Viral fitness plays an important role in HIV-1 evolution, transmission and
pathogenesis. However, how mutations accumulated during early infection affect viral fitness …

Antisense-derived HIV-1 cryptic epitopes are not major drivers of viral evolution during the acute phase of infection

BJ Peng, JM Carlson, MKP Liu, F Gao… - Journal of …, 2018 - Am Soc Microbiol
While prior studies have demonstrated that CD8 T cell responses to cryptic epitopes (CE)
are readily detectable during HIV-1 infection, their ability to drive escape mutations following …

Immunologic and virologic mechanisms for partial protection from intravenous challenge by an integration-defective SIV vaccine

C Wang, C Jiang, N Gao, K Zhang, D Liu, W Wang… - Viruses, 2017 - mdpi.com
The suppression of viral loads and identification of selection signatures in non-human
primates after challenge are indicators for effective human immunodeficiency virus …

[PDF][PDF] HIV-1 的隐身术: 变异与进化

丁龙飞, 何涌泉, 陈健, 张晓燕 - 生命科学, 2016 - lifescience.sinh.ac.cn
HIV-1 以其庞大的基因多样性及快速的变异能力, 不断地逃逸人类免疫系统的监控, 至今为止,
尚未研发出有效的疫苗和治愈方法. 研究HIV-1 的进化模式及其与人类免疫系统之间的“博弈” …

A strongly selected mutation in the HIV-1 genome is independent of T cell responses and neutralizing antibodies

D Liu, C Wang, B Hora, T Zuo, N Goonetilleke, MKP Liu… - Retrovirology, 2017 - Springer
Background Mutations rapidly accumulate in the HIV-1 genome after infection. Some of
those mutations are selected by host immune responses and often cause viral fitness losses …

T Cell Immunity Directed against Novel Anti-sense Cryptic Epitopes and Its Impact on HIV Viral Evolution

BJ Peng - 2018 - search.proquest.com
After nearly four decades of scientific research, a global solution in eradicating the human
immunodeficiency virus-1 (HIV-1) pandemic has still yet to be discovered. The advent of …