Algorithms to estimate Shapley value feature attributions

H Chen, IC Covert, SM Lundberg, SI Lee - Nature Machine Intelligence, 2023 - nature.com
Feature attributions based on the Shapley value are popular for explaining machine
learning models. However, their estimation is complex from both theoretical and …

An integrative view of serpins in health and disease: the contribution of SerpinA3

A Sánchez-Navarro, I González-Soria… - … of Physiology-Cell …, 2021 - journals.physiology.org
Serpins are a superfamily of proteins characterized by their common function as serine
protease inhibitors. So far, 36 serpins from nine clades have been identified. These proteins …

Explaining a series of models by propagating Shapley values

H Chen, SM Lundberg, SI Lee - Nature communications, 2022 - nature.com
Local feature attribution methods are increasingly used to explain complex machine
learning models. However, current methods are limited because they are extremely …

SERPINA3: stimulator or inhibitor of pathological changes

M De Mezer, J Rogaliński, S Przewoźny, M Chojnicki… - Biomedicines, 2023 - mdpi.com
SERPINA3, also called α-1-antichymotrypsin (AACT, ACT), is one of the inhibitors of serine
proteases, one of which is cathepsin G. As an acute-phase protein secreted into the plasma …

Unfolding the cascade of SERPINA3: Inflammation to cancer

A Soman, SA Nair - Biochimica et Biophysica Acta (BBA)-Reviews on …, 2022 - Elsevier
Abstract SERine Protease INhibitor clade A member 3 (SERPINA3), a member of the
SERine-Protease INhibitor (SERPIN) superfamily, principally works as a protease inhibitor in …

Serpin signatures in prion and Alzheimer's diseases

M Zattoni, M Mearelli, S Vanni, A Colini Baldeschi… - Molecular …, 2022 - Springer
Serpins represent the most broadly distributed superfamily of proteases inhibitors. They
contribute to a variety of physiological functions and any alteration of the serpin-protease …

Distinct translatome changes in specific neural populations precede electroencephalographic changes in prion-infected mice

L Kaczmarczyk, M Schleif, L Dittrich, RH Williams… - PLoS …, 2022 - journals.plos.org
Selective vulnerability is an enigmatic feature of neurodegenerative diseases (NDs),
whereby a widely expressed protein causes lesions in specific cell types and brain regions …

Inhibition of SERPINA3N‐dependent neuroinflammation is essential for melatonin to ameliorate trimethyltin chloride–induced neurotoxicity

Y Xi, M Liu, S Xu, H Hong, M Chen… - Journal of pineal …, 2019 - Wiley Online Library
Trimethyltin chloride (TMT) is a potent neurotoxin that causes neuroinflammation and
neuronal cell death. Melatonin is a well‐known anti‐inflammatory agent with significant …

[HTML][HTML] Region-specific glial homeostatic signature in prion diseases is replaced by a uniform neuroinflammation signature, common for brain regions and prion …

N Makarava, JCY Chang, K Molesworth… - Neurobiology of …, 2020 - Elsevier
Chronic neuroinflammation is recognized as a major neuropathological hallmark in a broad
spectrum of neurodegenerative diseases including Alzheimer's, Parkinson's, Frontal …

Novel exosome biomarker candidates for Alzheimer's disease unravelled through mass spectrometry analysis

T Soares Martins, R Marçalo, CB da Cruz e Silva… - Molecular …, 2022 - Springer
Exosomes are small extracellular vesicles (EVs) present in human biofluids that can
transport specific disease-associated molecules. Consequently blood-derived exosomes …