Cytoplasmic DNA: sources, sensing, and role in aging and disease

KN Miller, SG Victorelli, H Salmonowicz, N Dasgupta… - Cell, 2021 - cell.com
Endogenous cytoplasmic DNA (cytoDNA) species are emerging as key mediators of
inflammation in diverse physiological and pathological contexts. Although the role of …

Regulation of transposable elements by DNA modifications

Ö Deniz, JM Frost, MR Branco - Nature Reviews Genetics, 2019 - nature.com
Maintenance of genome stability requires control over the expression of transposable
elements (TEs), whose activity can have substantial deleterious effects on the host …

FTO mediates LINE1 m6A demethylation and chromatin regulation in mESCs and mouse development

J Wei, X Yu, L Yang, X Liu, B Gao, B Huang, X Dou… - Science, 2022 - science.org
N 6-methyladenosine (m6A) is the most abundant internal modification on mammalian
messenger RNA. It is installed by a writer complex and can be reversed by erasers such as …

[HTML][HTML] A LINE1-nucleolin partnership regulates early development and ESC identity

M Percharde, CJ Lin, Y Yin, J Guan, GA Peixoto… - Cell, 2018 - cell.com
Transposable elements represent nearly half of mammalian genomes and are generally
described as parasites, or" junk DNA." The LINE1 retrotransposon is the most abundant …

Insights into epigenetic patterns in mammalian early embryos

R Xu, C Li, X Liu, S Gao - Protein & cell, 2021 - academic.oup.com
Mammalian fertilization begins with the fusion of two specialized gametes, followed by major
epigenetic remodeling leading to the formation of a totipotent embryo. During the …

Restricting retrotransposons: a review

JL Goodier - Mobile DNA, 2016 - Springer
Retrotransposons have generated about 40% of the human genome. This review examines
the strategies the cell has evolved to coexist with these genomic “parasites”, focussing on …

Intrinsic retroviral reactivation in human preimplantation embryos and pluripotent cells

EJ Grow, RA Flynn, SL Chavez, NL Bayless… - Nature, 2015 - nature.com
Endogenous retroviruses (ERVs) are remnants of ancient retroviral infections, and comprise
nearly 8% of the human genome. The most recently acquired human ERV is HERVK (HML …

[HTML][HTML] Circulating immune cells mediate a systemic RNAi-based adaptive antiviral response in Drosophila

M Tassetto, M Kunitomi, R Andino - Cell, 2017 - cell.com
Effective antiviral protection in multicellular organisms relies on both cell-autonomous and
systemic immunity. Systemic immunity mediates the spread of antiviral signals from infection …

LINE-1 activation after fertilization regulates global chromatin accessibility in the early mouse embryo

JW Jachowicz, X Bing, J Pontabry, A Bošković… - Nature …, 2017 - nature.com
After fertilization, to initiate development, gametes are reprogramed to become totipotent.
Approximately half of the mammalian genome consists of repetitive elements, including …

The influence of LINE‐1 and SINE retrotransposons on mammalian genomes

SR Richardson, AJ Doucet, HC Kopera… - Mobile DNA …, 2015 - Wiley Online Library
Transposable elements (TEs) or “jumping genes” historically have been disparaged as a
class of “junk DNA” in mammalian genomes (1, 2). The advent of whole genome DNA …