Metabolic and transcriptomic reprogramming during contact inhibition-induced quiescence is mediated by YAP-dependent and YAP-independent mechanisms

S Kang, MR Antoniewicz, N Hay - Nature Communications, 2024 - nature.com
Metabolic rewiring during the proliferation-to-quiescence transition is poorly understood.
Here, using a model of contact inhibition-induced quiescence, we conducted 13C-metabolic …

HIF1α-regulated glycolysis promotes activation-induced cell death and IFN-γ induction in hypoxic T cells

H Shen, OA Ojo, H Ding, LJ Mullen, C Xing… - Nature …, 2024 - nature.com
Hypoxia is a common feature in various pathophysiological contexts, including tumor
microenvironment, and IFN-γ is instrumental for anti-tumor immunity. HIF1α has long been …

Stable Isotope Tracing Analysis in Cancer Research: Advancements and Challenges in Identifying Dysregulated Cancer Metabolism and Treatment Strategies

D Hilovsky, J Hartsell, JD Young, X Liu - Metabolites, 2024 - mdpi.com
Metabolic reprogramming is a hallmark of cancer, driving the development of therapies
targeting cancer metabolism. Stable isotope tracing has emerged as a widely adopted tool …

[HTML][HTML] Ala-Cys-Cys-Ala dipeptide dimer alleviates problematic cysteine and cystine levels in media formulations and enhances CHO cell growth and metabolism

P Ladiwala, X Cai, HM Naik, L Aliyu, M Schilling… - Metabolic …, 2024 - Elsevier
Cysteine and cystine are essential amino acids present in mammalian cell cultures. While
contributing to biomass synthesis, recombinant protein production, and antioxidant defense …

Elucidating uptake and metabolic fate of dipeptides in CHO cell cultures using 13C labeling experiments and kinetic modeling

HM Naik, X Cai, P Ladiwala, JV Reddy… - Metabolic …, 2024 - Elsevier
The rapidly growing market of biologics including monoclonal antibodies has stimulated the
need to improve biomanufacturing processes including mammalian host systems such as …

Cross-feeding of amino acid pathway intermediates is common in co-cultures of auxotrophic Escherichia coli

YJ Hong, Y Cai, MR Antoniewicz - Metabolic Engineering, 2025 - Elsevier
Amino acid auxotrophy refers to an organism's inability to synthesize one or more amino
acids that are required for cell growth. In microbiome research, co-cultures of amino acid …

Leveraging high-resolution mass spectrometry detection of stable isotopes for metabolomics

JD Gomez - 2024 - search.proquest.com
In recent decades, the use of stable isotopes in metabolomics has fueled groundbreaking
discoveries in metabolism research, enabling the tracking of metabolically active …

Leveraging high-resolution mass spectrometry detection of stable isotopes for metabolomics

JD Gomez Castro - 2024 - ir.vanderbilt.edu
In recent decades, the use of stable isotopes in metabolomics has fueled groundbreaking
discoveries in metabolism research, enabling the tracking of metabolically active …