Synthetic microbiology in sustainability applications

EM Jones, JP Marken, PA Silver - Nature Reviews Microbiology, 2024 - nature.com
Microorganisms are a promising means to address many societal sustainability challenges
owing to their ability to thrive in diverse environments and interface with the microscale …

Safety by design: Biosafety and biosecurity in the age of synthetic genomics

SA Hoffmann, J Diggans, D Densmore, J Dai, T Knight… - Iscience, 2023 - cell.com
Technologies to profoundly engineer biology are becoming increasingly affordable,
powerful, and accessible to a widening group of actors. While offering tremendous potential …

A swapped genetic code prevents viral infections and gene transfer

A Nyerges, S Vinke, R Flynn, SV Owen, EA Rand… - Nature, 2023 - nature.com
Engineering the genetic code of an organism has been proposed to provide a firewall from
natural ecosystems by preventing viral infections and gene transfer,,,,–. However, numerous …

Continuous synthesis of E. coli genome sections and Mb-scale human DNA assembly

JF Zürcher, AA Kleefeldt, LFH Funke, J Birnbaum… - Nature, 2023 - nature.com
Whole-genome synthesis provides a powerful approach for understanding and expanding
organism function,–. To build large genomes rapidly, scalably and in parallel, we need (1) …

A designer synthetic chromosome fragment functions in moss

LG Chen, T Lan, S Zhang, M Zhao, G Luo, Y Gao… - Nature Plants, 2024 - nature.com
Rapid advances in DNA synthesis techniques have enabled the assembly and engineering
of viral and microbial genomes, presenting new opportunities for synthetic genomics in …

A robust yeast biocontainment system with two-layered regulation switch dependent on unnatural amino acid

T Chang, W Ding, S Yan, Y Wang, H Zhang… - Nature …, 2023 - nature.com
Synthetic auxotrophy in which cell viability depends on the presence of an unnatural amino
acid (unAA) provides a powerful strategy to restrict unwanted propagation of genetically …

[HTML][HTML] Genome engineering on size reduction and complexity simplification: a review

XR Chen, YZ Cui, BZ Li, YJ Yuan - Journal of Advanced Research, 2024 - Elsevier
Background Genome simplification is an important topic in the field of life sciences that has
attracted attention from its conception to the present day. It can help uncover the essential …

The design and engineering of synthetic genomes

JS James, J Dai, WL Chew, Y Cai - Nature Reviews Genetics, 2024 - nature.com
Synthetic genomics seeks to design and construct entire genomes to mechanistically dissect
fundamental questions of genome function and to engineer organisms for diverse …

Reduction-to-synthesis: the dominant approach to genome-scale synthetic biology

K Kim, D Choe, S Cho, B Palsson, BK Cho - Trends in Biotechnology, 2024 - cell.com
Advances in systems and synthetic biology have propelled the construction of reduced
bacterial genomes. Genome reduction was initially focused on exploring properties of …

Robust genetic codes enhance protein evolvability

H Rozhoňová, C Martí-Gómez, DM McCandlish… - PLoS …, 2024 - journals.plos.org
The standard genetic code defines the rules of translation for nearly every life form on Earth.
It also determines the amino acid changes accessible via single-nucleotide mutations, thus …