New approaches to population stratification in genome-wide association studies

AL Price, NA Zaitlen, D Reich, N Patterson - Nature reviews genetics, 2010 - nature.com
Genome-wide association (GWA) studies are an effective approach for identifying genetic
variants associated with disease risk. GWA studies can be confounded by population …

Identification of novel risk loci for restless legs syndrome in genome-wide association studies in individuals of European ancestry: a meta-analysis

B Schormair, C Zhao, S Bell, E Tilch… - The Lancet …, 2017 - thelancet.com
Background Restless legs syndrome is a prevalent chronic neurological disorder with
potentially severe mental and physical health consequences. Clearer understanding of the …

Controlling bias and inflation in epigenome-and transcriptome-wide association studies using the empirical null distribution

M van Iterson, EW van Zwet, Bios Consortium… - Genome biology, 2017 - Springer
We show that epigenome-and transcriptome-wide association studies (EWAS and TWAS)
are prone to significant inflation and bias of test statistics, an unrecognized phenomenon …

Principal components analysis corrects for stratification in genome-wide association studies

AL Price, NJ Patterson, RM Plenge, ME Weinblatt… - Nature …, 2006 - nature.com
Population stratification—allele frequency differences between cases and controls due to
systematic ancestry differences—can cause spurious associations in disease studies. We …

Complement factor H polymorphism in age-related macular degeneration

RJ Klein, C Zeiss, EY Chew, JY Tsai, RS Sackler… - Science, 2005 - science.org
Age-related macular degeneration (AMD) is a major cause of blindness in the elderly. We
report a genome-wide screen of 96 cases and 50 controls for polymorphisms associated …

Genome-wide association yields new sequence variants at seven loci that associate with measures of obesity

G Thorleifsson, GB Walters, DF Gudbjartsson… - Nature …, 2009 - nature.com
Obesity results from the interaction of genetic and environmental factors. To search for
sequence variants that affect variation in two common measures of obesity, weight and body …

A variant associated with nicotine dependence, lung cancer and peripheral arterial disease

TE Thorgeirsson, F Geller, P Sulem, T Rafnar, A Wiste… - Nature, 2008 - nature.com
Smoking is a leading cause of preventable death, causing about 5 million premature deaths
worldwide each year,. Evidence for genetic influence on smoking behaviour and nicotine …

Sequence variants affecting eosinophil numbers associate with asthma and myocardial infarction

DF Gudbjartsson, US Bjornsdottir, E Halapi… - Nature …, 2009 - nature.com
Eosinophils are pleiotropic multifunctional leukocytes involved in initiation and propagation
of inflammatory responses and thus have important roles in the pathogenesis of …

Quality control procedures for genome‐wide association studies

S Turner, LL Armstrong, Y Bradford… - Current protocols in …, 2011 - Wiley Online Library
Genome‐wide association studies (GWAS) are being conducted at an unprecedented rate
in population‐based cohorts and have increased our understanding of the pathophysiology …

Genetic determinants of hair, eye and skin pigmentation in Europeans

P Sulem, DF Gudbjartsson, SN Stacey, A Helgason… - Nature …, 2007 - nature.com
Hair, skin and eye colors are highly heritable and visible traits in humans. We carried out a
genome-wide association scan for variants associated with hair and eye pigmentation, skin …