Molecular mechanisms of adaptive evolution in wild animals and plants

Y Hu, X Wang, Y Xu, H Yang, Z Tong, R Tian… - Science China Life …, 2023 - Springer
Wild animals and plants have developed a variety of adaptive traits driven by adaptive
evolution, an important strategy for species survival and persistence. Uncovering the …

Genome evolution in plants and the origins of innovation

JW Clark - New Phytologist, 2023 - Wiley Online Library
Plant evolution has been characterised by a series of major novelties in their vegetative and
reproductive traits that have led to greater complexity. Underpinning this diversification has …

Establishment, maintenance, and recall of inflammatory memory

SB Larsen, CJ Cowley, SM Sajjath, D Barrows, Y Yang… - Cell stem cell, 2021 - cell.com
Known for nearly a century but through mechanisms that remain elusive, cells retain a
memory of inflammation that equips them to react quickly and broadly to diverse secondary …

Divergent evolutionary trajectories of bryophytes and tracheophytes from a complex common ancestor of land plants

BJ Harris, JW Clark, D Schrempf, GJ Szöllősi… - Nature Ecology & …, 2022 - nature.com
The origin of plants and their colonization of land fundamentally transformed the terrestrial
environment. Here we elucidate the basis of this formative episode in Earth history through …

Six reference-quality genomes reveal evolution of bat adaptations

D Jebb, Z Huang, M Pippel, GM Hughes… - Nature, 2020 - nature.com
Bats possess extraordinary adaptations, including flight, echolocation, extreme longevity
and unique immunity. High-quality genomes are crucial for understanding the molecular …

Integrating gene annotation with orthology inference at scale

BM Kirilenko, C Munegowda, E Osipova, D Jebb… - Science, 2023 - science.org
Annotating coding genes and inferring orthologs are two classical challenges in genomics
and evolutionary biology that have traditionally been approached separately, limiting …

Convergent regulatory evolution and loss of flight in paleognathous birds

TB Sackton, P Grayson, A Cloutier, Z Hu, JS Liu… - Science, 2019 - science.org
A core question in evolutionary biology is whether convergent phenotypic evolution is driven
by convergent molecular changes in proteins or regulatory regions. We combined …

Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy

MH Li, KW Liu, Z Li, HC Lu, QL Ye, D Zhang, JY Wang… - Nature Plants, 2022 - nature.com
To improve our understanding of the origin and evolution of mycoheterotrophic plants, we
here present the chromosome-scale genome assemblies of two sibling orchid species …

Genes lost during the transition from land to water in cetaceans highlight genomic changes associated with aquatic adaptations

M Huelsmann, N Hecker, MS Springer, J Gatesy… - Science …, 2019 - science.org
The transition from land to water in whales and dolphins (cetaceans) was accompanied by
remarkable adaptations. To reveal genomic changes that occurred during this transition, we …

Gene loss predictably drives evolutionary adaptation

J Helsen, K Voordeckers… - Molecular Biology …, 2020 - academic.oup.com
Loss of gene function is common throughout evolution, even though it often leads to reduced
fitness. In this study, we systematically evaluated how an organism adapts after deleting …