Positional information is a central concept in developmental biology. In developing organs,
positional information can be idealized as a local coordinate system that arises from …

Cell-cell interactions are central to development, but exploring how a change in any given
cell relates to changes in the neighbour of that cell can be technically challenging. Here, we …

The extraction of spatiotemporal neuron activity from calcium imaging videos plays a crucial
role in unraveling the coding properties of neurons. While existing neuron extraction …

Recent advances in computer vision have led to significant progress in the generation of
realistic image data, with denoising diffusion probabilistic models proving to be a particularly …

Background High quality 3D information of the microscopic plant tissue morphology—the
spatial organization of cells and intercellular spaces in tissues—helps in understanding …

Automated image processing approaches are indispensable for many biomedical
experiments and help to cope with the increasing amount of microscopy image data in a fast …

Cell culture is undeniably important for multiple scientific applications, including
pharmaceuticals, transplants, and cosmetics. However, cell culture involves multiple manual …

Motivation Accurate segmentation and recognition of C. elegans cells are critical for various
biological studies, including gene expression, cell lineages, and cell fates analysis at single …

Analysing the tissue morphogenesis and function is crucial for unravelling the underlying
mechanisms of tissue development and disease. Organoids, 3D in vitro models that mimic …

Computational analysis of bio-images by deep learning (DL) algorithms has made
exceptional progress in recent years and has become much more accessible to non …