Evolution of pyrrolysyl-tRNA synthetase: From methanogenesis to genetic code expansion

NG Koch, N Budisa - Chemical Reviews, 2024 - ACS Publications
Over 20 years ago, the pyrrolysine encoding translation system was discovered in specific
archaea. Our Review provides an overview of how the once obscure pyrrolysyl-tRNA …

Cracking the code: reprogramming the genetic script in prokaryotes and eukaryotes to harness the power of noncanonical amino acids

C Jann, S Giofré, R Bhattacharjee, EA Lemke - Chemical Reviews, 2024 - ACS Publications
Over 500 natural and synthetic amino acids have been genetically encoded in the last two
decades. Incorporating these noncanonical amino acids into proteins enables many …

Engineering pyrrolysine systems for genetic code expansion and reprogramming

DL Dunkelmann, JW Chin - Chemical Reviews, 2024 - ACS Publications
Over the past 16 years, genetic code expansion and reprogramming in living organisms has
been transformed by advances that leverage the unique properties of pyrrolysyl-tRNA …

Genetic Code Expansion Approaches to Decipher the Ubiquitin Code

V Wanka, M Fottner, M Cigler, K Lang - Chemical Reviews, 2024 - ACS Publications
The covalent attachment of Ub (ubiquitin) to target proteins (ubiquitylation) represents one of
the most versatile PTMs (post-translational modifications) in eukaryotic cells. Substrate …

Spatiotemporal protein interactome profiling through condensation-enhanced photocrosslinking

K Li, X Xie, R Gao, Z Chen, M Yang, Z Wen, Y Weng… - Nature Chemistry, 2024 - nature.com
Resolving protein–protein interactions (PPIs) inside biomolecular condensates is crucial for
elucidating their functions and regulation mechanisms. The transient nature of condensates …

Genetic code expansion for mechanistic studies in ion channels: an (un) natural union of chemistry and biology

DT Infield, ME Schene, JD Galpin, CA Ahern - Chemical reviews, 2024 - ACS Publications
Ion channels play central roles in biology and human health by catalyzing the
transmembrane flow of electrical charge. These proteins are ideal targets for genetic code …

Bacterial effector restricts liquid-liquid phase separation of ZPR1 to antagonize host UPRER

X Ouyang, X Wang, P Li, Q Huang, L Zhou, J Li, L Gao… - Cell Reports, 2023 - cell.com
How pathogens manipulate host UPR ER to mediate immune evasion is largely unknown.
Here, we identify the host zinc finger protein ZPR1 as an interacting partner of the …

Genetic Code Expansion History and Modern Innovations

A Costello, AA Peterson, PH Chen… - Chemical …, 2024 - ACS Publications
The genetic code is the foundation for all life. With few exceptions, the translation of nucleic
acid messages into proteins follows conserved rules, which are defined by codons that …

Non-canonical amino acids in analyses of protease structure and function

P Goettig, NG Koch, N Budisa - International Journal of Molecular …, 2023 - mdpi.com
All known organisms encode 20 canonical amino acids by base triplets in the genetic code.
The cellular translational machinery produces proteins consisting mainly of these amino …

Reaching New Heights in Genetic Code Manipulation with High Throughput Screening

BR Lino, SJ Williams, ME Castor… - Chemical …, 2024 - ACS Publications
The chemical and physical properties of proteins are limited by the 20 canonical amino
acids. Genetic code manipulation allows for the incorporation of noncanonical amino acids …