Targeted genome-modification tools and their advanced applications in crop breeding

B Li, C Sun, J Li, C Gao - Nature Reviews Genetics, 2024 - nature.com
Crop improvement by genome editing involves the targeted alteration of genes to improve
plant traits, such as stress tolerance, disease resistance or nutritional content. Techniques …

Gene editing of non-coding regulatory DNA and its application in crop improvement

YH Chen, J Lu, X Yang, LC Huang… - Journal of …, 2023 - academic.oup.com
The development of the clustered regularly interspaced short palindromic repeats/CRISPR-
associated protein (CRISPR/Cas) system has provided precise and efficient strategies to …

Directed evolution rice genes with randomly multiplexed sgRNAs assembly of base editors

A Zhang, T Shan, Y Sun, Z Chen, J Hu… - Plant Biotechnology …, 2023 - Wiley Online Library
CRISPR‐based directed evolution is an effective breeding biotechnology to improve
agronomic traits in plants. However, its gene diversification is still limited using individual …

[HTML][HTML] CRISPR/Cas genome editing in soybean: Challenges and new insights to overcome existing bottlenecks

NS Freitas-Alves, CE Moreira-Pinto… - Journal of Advanced …, 2024 - Elsevier
Background Soybean is a worldwide-cultivated crop due to its applications in the food, feed,
and biodiesel industries. Genome editing in soybean began with ZFN and TALEN …

Optimizing ErCas12a for efficient gene editing in Arabidopsis thaliana

J Pietralla, N Capdeville, P Schindele… - Plant Biotechnology …, 2024 - Wiley Online Library
Summary The Er Cas12a nuclease, also known as MAD7, is part of a CRISPR/Cas system
from Eubacterium rectale and distantly related to Cas12a nucleases. As it shares only 31 …

Precise fine-turning of GhTFL1 by base editing tools defines ideal cotton plant architecture

G Wang, F Wang, Z Xu, Y Wang, C Zhang, Y Zhou… - Genome Biology, 2024 - Springer
Background CRISPR/Cas-derived base editor enables precise editing of target sites and
has been widely used for basic research and crop genetic improvement. However, the …

High performance TadA-8e derived cytosine and dual base editors with undetectable off-target effects in plants

T Fan, Y Cheng, Y Wu, S Liu, X Tang, Y He… - Nature …, 2024 - nature.com
Cytosine base editors (CBEs) and adenine base editors (ABEs) enable precise C-to-T and A-
to-G edits. Recently, ABE8e, derived from TadA-8e, enhances A-to-G edits in mammalian …

CRISPR–Cas systems and applications for crop bioengineering

M Uranga, AM Martín-Hernández… - … in Bioengineering and …, 2024 - frontiersin.org
CRISPR–Cas technologies contribute to enhancing our understanding of plant gene
functions, and to the precise breeding of crop traits. Here, we review the latest progress in …

The type V effectors for CRISPR/Cas-mediated genome engineering in plants

R Zhang, N Chai, T Liu, Z Zheng, Q Lin, X Xie… - Biotechnology …, 2024 - Elsevier
A plethora of CRISPR effectors, such as Cas3, Cas9, and Cas12a, are commonly employed
as gene editing tools. Among these, Cas12 effectors developed based on Class II type V …

Multiplexed in-situ mutagenesis driven by a dCas12a-based dual-function base editor

Y Wu, Y Li, Y Liu, X Xiu, J Liu, L Zhang, J Li… - Nucleic Acids …, 2024 - academic.oup.com
Mutagenesis driving genetic diversity is vital for understanding and engineering biological
systems. However, the lack of effective methods to generate in-situ mutagenesis in multiple …