Coupling and coordination in gene expression processes: a systems biology view

S Komili, PA Silver - Nature Reviews Genetics, 2008 - nature.com
Genome-scale analyses have allowed us to progress beyond studying gene expression at
the level of individual components of a given process by providing global information about …

[图书][B] The Chlamydomonas Sourcebook: Introduction to Chlamydomonas and Its Laboratory Use: Volume 1

EH Harris - 2009 - books.google.com
Dr. Harris has played a major role in the development of this organism as a model system.
Her previous version of the Chlamydomonas Sourcebook which published in 1989, has …

Transcriptional regulation at the nuclear pore complex

CR Brown, PA Silver - Current opinion in genetics & development, 2007 - Elsevier
The nonrandom spatial distribution of chromosomes and genes in the eukaryotic nucleus
has been appreciated for decades, although a detailed understanding of the functional role …

[HTML][HTML] Dnmt1-independent CG methylation contributes to nucleosome positioning in diverse eukaryotes

JT Huff, D Zilberman - Cell, 2014 - cell.com
Dnmt1 epigenetically propagates symmetrical CG methylation in many eukaryotes. Their
genomes are typically depleted of CG dinucleotides because of imperfect repair of …

Mechanism of mRNA transport in the nucleus

DY Vargas, A Raj, SAE Marras… - Proceedings of the …, 2005 - National Acad Sciences
The mechanism of transport of mRNA-protein (mRNP) complexes from transcription sites to
nuclear pores has been the subject of many studies. Using molecular beacons to track …

Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

JM Casolari, CR Brown, DA Drubin… - Genes & …, 2005 - genesdev.cshlp.org
Although the spatial location of genes within the nucleus has been implicated in their
transcriptional status, little is known about the dynamics of gene location that accompany …

Photosystem II Assembly and Repair Are Differentially Localized in Chlamydomonas

J Uniacke, W Zerges - The Plant Cell, 2007 - academic.oup.com
Many proteins of the photosynthesis complexes are encoded by the genome of the
chloroplast and synthesized by bacterium-like ribosomes within this organelle. To determine …

3D nuclear architecture reveals coupled cell cycle dynamics of chromatin and nuclear pores in the malaria parasite Plasmodium falciparum

A Weiner, N Dahan‐Pasternak, E Shimoni… - Cellular …, 2011 - Wiley Online Library
The deadliest form of human malaria is caused by the protozoan parasite Plasmodium
falciparum. The complex life cycle of this parasite is associated with tight transcriptional …

Chloroplast protein targeting involves localized translation in Chlamydomonas

J Uniacke, W Zerges - … of the National Academy of Sciences, 2009 - National Acad Sciences
The compartmentalization of eukaryotic cells requires that newly synthesized proteins be
targeted to the compartments in which they function. In chloroplasts, a few thousand proteins …

Stress induces the assembly of RNA granules in the chloroplast of Chlamydomonas reinhardtii

J Uniacke, W Zerges - The Journal of cell biology, 2008 - rupress.org
Eukaryotic cells under stress repress translation and localize these messenger RNAs
(mRNAs) to cytoplasmic RNA granules. We show that specific stress stimuli induce the …