Long noncoding RNAs (lncRNAs) are a large and diverse class of genes in eukaryotic
genomes that contribute to a variety of regulatory processes. Functionally characterized …

Throughout the years, most plant genomic studies were focused on nuclear chromosomes.
Extrachromosomal circular DNA (eccDNA) has largely been neglected for decades since its …

Non-coding RNAs (ncRNAs) comprise a set of abundant and functionally diverse RNA
molecules. Since the discovery of the first ncRNA in the 1960s, ncRNAs have been shown to …

Pervasive transcription of eukaryotic genomes results in expression of long non-coding
RNAs (lncRNAs) most of which are poorly conserved in evolution and appear to be non …

Increased fructose intake is an international issue. A maternal high-fructose diet during
gestation and lactation could affect nervous system development in offspring. Long non …

Seeds have enormous economic importance as source of calories, nutrition, edible oil, and
biofuels. Therefore, seed traits like seed size and shape, weight, micronutrient content, oil …

Transposable elements (TEs) are major components of plant genomes with the ability to
change their position in the genome or to create new copies of themselves in other positions …

Among all economically important plant species in the world, grapevine (Vitis vinifera L.) is
the most cultivated fruit plant. It has a significant impact on the economies of many countries …

DNA methylation (5mC) and N6-methyladenosine (m6A) are two important epigenetics
regulators, which have a profound impact on plant growth development. Phyllostachys …

Analysis of eukaryotic genomes requires the detection and classification of transposable
elements (TEs), a crucial but complex and time-consuming task. To improve the …