Proposal to reclassify the proteobacterial classes Deltaproteobacteria and Oligoflexia, and the phylum Thermodesulfobacteria into four phyla reflecting major …

DW Waite, M Chuvochina, C Pelikan… - … of Systematic and …, 2020 - microbiologyresearch.org
The class Deltaproteobacteria comprises an ecologically and metabolically diverse group of
bacteria best known for dissimilatory sulphate reduction and predatory behaviour. Although …

Does nonneutral evolution shape observed patterns of DNA variation in animal mitochondrial genomes?

AS Gerber, R Loggins, S Kumar… - Annual review of …, 2001 - annualreviews.org
▪ Abstract Early studies of animal mitochondrial DNA (mtDNA) assumed that nucleotide
sequence variation was neutral. Recent analyses of sequences from a variety of taxa have …

[图书][B] Evolution: Probleme—Themen—Fragen

M Ridley - 2013 - books.google.com
Beim Studium der jüngeren Kontroversen über den Darwinismus fiel mir wiederholt auf, das
sie falsche Darstellungen enthielten, so als würde es sich um irgendetwas Umfassenderes …

Identification of a deep-branching thermophilic clade sheds light on early bacterial evolution

H Leng, Y Wang, W Zhao, SM Sievert, X Xiao - Nature Communications, 2023 - nature.com
It has been proposed that early bacteria, or even the last universal common ancestor of all
cells, were thermophilic. However, research on the origin and evolution of thermophily is …

Taxon sampling and the accuracy of phylogenetic analyses

TA Heath, SM Hedtke, DM Hillis - Journal of systematics and evolution, 2008 - jse.ac.cn
Appropriate and extensive taxon sampling is one of the most important determinants of
accurate phylogenetic estimation. In addition, accuracy of inferences about evolutionary …

Constructive neutral evolution: exploring evolutionary theory's curious disconnect

A Stoltzfus - Biology direct, 2012 - Springer
Constructive neutral evolution (CNE) suggests that neutral evolution may follow a stepwise
path to extravagance. Whether or not CNE is common, the mere possibility raises …

The extent of codon usage bias in human RNA viruses and its evolutionary origin

GM Jenkins, EC Holmes - Virus research, 2003 - Elsevier
Revealing the determinants of codon usage bias is central to the understanding of factors
governing viral evolution. Herein, we report the results of a survey of codon usage bias in a …

Modeling compositional heterogeneity

PG Foster - Systematic biology, 2004 - academic.oup.com
Compositional heterogeneity among lineages can compromise phylogenetic analyses,
because models in common use assume compositionally homogeneous data. Models that …

How do insect nuclear and mitochondrial gene substitution patterns differ? Insights from Bayesian analyses of combined datasets

CP Lin, BN Danforth - Molecular phylogenetics and evolution, 2004 - Elsevier
We analyzed 12 combined mitochondrial and nuclear gene datasets in seven orders of
insects using both equal weights parsimony (to evaluate phylogenetic utility) and Bayesian …

The polyphyly of Plasmodium: comprehensive phylogenetic analyses of the malaria parasites (order Haemosporida) reveal widespread taxonomic conflict

SC Galen, J Borner, ES Martinsen… - Royal Society …, 2018 - royalsocietypublishing.org
The evolutionary relationships among the apicomplexan blood pathogens known as the
malaria parasites (order Haemosporida), some of which infect nearly 200 million humans …