The Hedgehog pathway: role in cell differentiation, polarity and proliferation

Y Jia, Y Wang, J Xie - Archives of toxicology, 2015 - Springer
Hedgehog (Hh) is first described as a genetic mutation that has “spiked” phenotype in the
cuticles of Drosophila in later 1970s. Since then, Hh signaling has been implicated in …

Deep transfer learning for inter-chain contact predictions of transmembrane protein complexes

P Lin, Y Yan, H Tao, SY Huang - Nature Communications, 2023 - nature.com
Membrane proteins are encoded by approximately a quarter of human genes. Inter-chain
residue-residue contact information is important for structure prediction of membrane protein …

Targeting of Smoothened for therapeutic gain

M Ruat, L Hoch, H Faure, D Rognan - Trends in Pharmacological Sciences, 2014 - cell.com
The Smoothened (Smo) receptor is a key transducer of the Hedgehog (Hh) signaling
pathway, which plays a critical role in tissue maintenance and repair. Recent studies have …

The role of interfacial lipids in stabilizing membrane protein oligomers

K Gupta, JAC Donlan, JTS Hopper, P Uzdavinys… - Nature, 2017 - nature.com
Oligomerization of membrane proteins in response to lipid binding has a critical role in many
cell-signalling pathways but is often difficult to define or predict. Here we report the …

Crystal structure of rhodopsin in complex with a mini-Go sheds light on the principles of G protein selectivity

CJ Tsai, F Pamula, R Nehmé, J Mühle, T Weinert… - Science …, 2018 - science.org
Selective coupling of G protein (heterotrimeric guanine nucleotide–binding protein)–coupled
receptors (GPCRs) to specific Gα-protein subtypes is critical to transform extracellular …

Visualizing specific cross-protomer interactions in the homo-oligomeric membrane protein proteorhodopsin by dynamic-nuclear-polarization-enhanced solid-state …

J Maciejko, M Mehler, J Kaur, T Lieblein… - Journal of the …, 2015 - ACS Publications
Membrane proteins often form oligomeric complexes within the lipid bilayer, but factors
controlling their assembly are hard to predict and experimentally difficult to determine. An …

Recent advances and applications of molecular docking to G protein-coupled receptors

D Bartuzi, AA Kaczor, KM Targowska-Duda… - Molecules, 2017 - mdpi.com
The growing number of studies on G protein-coupled receptors (GPCRs) family are a source
of noticeable improvement in our understanding of the functioning of these proteins. GPCRs …

How physical forces drive the process of helical membrane protein folding

K Corin, JU Bowie - EMBO reports, 2022 - embopress.org
Protein folding is a fundamental process of life with important implications throughout
biology. Indeed, tens of thousands of mutations have been associated with diseases, and …

Ion mobility–mass spectrometry reveals the role of peripheral myelin protein dimers in peripheral neuropathy

SM Fantin, KF Parson, P Yadav… - Proceedings of the …, 2021 - National Acad Sciences
Peripheral myelin protein (PMP22) is an integral membrane protein that traffics inefficiently
even in wild-type (WT) form, with only 20% of the WT protein reaching its final plasma …

Mcl-1 and Bok transmembrane domains: Unexpected players in the modulation of apoptosis

E Lucendo, M Sancho, F Lolicato… - Proceedings of the …, 2020 - National Acad Sciences
The Bcl-2 protein family comprises both pro-and antiapoptotic members that control the
permeabilization of the mitochondrial outer membrane, a crucial step in the modulation of …