Characterization of lipid–protein interactions and lipid-mediated modulation of membrane protein function through molecular simulation

MP Muller, T Jiang, C Sun, M Lihan, S Pant… - Chemical …, 2019 - ACS Publications
The cellular membrane constitutes one of the most fundamental compartments of a living
cell, where key processes such as selective transport of material and exchange of …

[HTML][HTML] Comparison of mechanistic transport cycle models of ABC exporters

D Szöllősi, D Rose-Sperling, UA Hellmich… - Biochimica et Biophysica …, 2018 - Elsevier
ABC (ATP binding cassette) transporters, ubiquitous in all kingdoms of life, carry out
essential substrate transport reactions across cell membranes. Their transmembrane …

Towards understanding promiscuity in multidrug efflux pumps

K Wong, J Ma, A Rothnie, PC Biggin, ID Kerr - Trends in biochemical …, 2014 - cell.com
Drug export from cells is a major factor in the acquisition of cellular resistance to
antimicrobial and cancer chemotherapy, and poses a significant threat to future clinical …

[HTML][HTML] Structure–function relationships in the human P-glycoprotein (ABCB1): insights from molecular dynamics simulations

L Mora Lagares, Y Pérez-Castillo, N Minovski… - International Journal of …, 2021 - mdpi.com
P-Glycoprotein (P-gp) is a transmembrane protein belonging to the ATP binding cassette
superfamily of transporters, and it is a xenobiotic efflux pump that limits intracellular drug …

Selective nutrient transport in bacteria: multicomponent transporter systems reign supreme

JS Davies, MJ Currie, JD Wright… - Frontiers in Molecular …, 2021 - frontiersin.org
Multicomponent transporters are used by bacteria to transport a wide range of nutrients.
These systems use a substrate-binding protein to bind the nutrient with high affinity and then …

Effect of the force field on molecular dynamics simulations of the multidrug efflux protein P-glycoprotein

L Wang, ML O'Mara - Journal of chemical theory and computation, 2021 - ACS Publications
Molecular dynamics (MD) simulations have been used extensively to study P-glycoprotein
(P-gp), a flexible multidrug transporter that is a key player in the development of multidrug …

Efflux mechanism and pathway of verapamil pumping by human P-glycoprotein

L Wang, Y Sun - Archives of biochemistry and biophysics, 2020 - Elsevier
Multidrug resistance (MDR) caused by overexpressed permeability–glycoprotein (P-gp) in
cancer cells is the main barrier for the cure of cancers. P-gp can pump many …

Structure-function relationships in ABCG2: insights from molecular dynamics simulations and molecular docking studies

RJ Ferreira, CA Bonito, MNDS Cordeiro… - Scientific reports, 2017 - nature.com
Efflux pumps of the ATP-binding cassette transporters superfamily (ABC transporters) are
frequently involved in the multidrug-resistance (MDR) phenomenon in cancer cells. Herein …

ABC transporter inhibition by beauvericin partially overcomes drug resistance in Leishmania tropica

C Al Khoury, S Thoumi, S Tokajian… - Antimicrobial Agents …, 2024 - Am Soc Microbiol
Leishmaniasis is a neglected tropical disease infecting the world's poorest populations.
Miltefosine (ML) remains the primary oral drug against the cutaneous form of leishmaniasis …

In silico pharmacology: Drug membrane partitioning and crossing

F Di Meo, G Fabre, K Berka, T Ossman… - Pharmacological …, 2016 - Elsevier
Over the past decade, molecular dynamics (MD) simulations have become particularly
powerful to rationalize drug insertion and partitioning in lipid bilayers. MD simulations …