Mitochondrial metagenomics: letting the genes out of the bottle

A Crampton-Platt, DW Yu, X Zhou, AP Vogler - GigaScience, 2016 - academic.oup.com
Abstract 'Mitochondrial metagenomics'(MMG) is a methodology for shotgun sequencing of
total DNA from specimen mixtures and subsequent bioinformatic extraction of mitochondrial …

Insect mitochondrial genomics: A decade of progress

SL Cameron - Annual Review of Entomology, 2024 - annualreviews.org
The past decade has seen the availability of insect genomic data explode, with
mitochondrial (mt) genome data seeing the greatest growth. The widespread adoption of …

Non‐specific amplification compromises environmental DNA metabarcoding with COI

RA Collins, J Bakker, OS Wangensteen… - Methods in Ecology …, 2019 - Wiley Online Library
Metabarcoding extra‐organismal DNA from environmental samples is now a key technique
in aquatic biomonitoring and ecosystem health assessment. Of critical consideration when …

The beetle tree of life reveals that C oleoptera survived end‐P ermian mass extinction to diversify during the C retaceous terrestrial revolution

DD Mckenna, AL Wild, K Kanda… - Systematic …, 2015 - Wiley Online Library
Here we present a phylogeny of beetles (I nsecta: C oleoptera) based on DNA sequence
data from eight nuclear genes, including six single‐copy nuclear protein‐coding genes, for …

Mitochondrial phylogenomics of Hemiptera reveals adaptive innovations driving the diversification of true bugs

H Li, JM Leavengood Jr… - … of the Royal …, 2017 - royalsocietypublishing.org
Hemiptera, the largest non-holometabolous order of insects, represents approximately 7% of
metazoan diversity. With extraordinary life histories and highly specialized morphological …

Evolution and diversity of bark and ambrosia beetles

LR Kirkendall, PHW Biedermann, BH Jordal - Bark beetles, 2015 - Elsevier
We review the morphology, larval feeding habits, reproductive behavior, and social behavior
of Scolytinae and Platypodinae. Their morphology and behavior are adaptations to a …

Introducing BASE: the Biomes of Australian Soil Environments soil microbial diversity database

A Bissett, A Fitzgerald, T Meintjes, PM Mele, F Reith… - GigaScience, 2016 - Springer
Background Microbial inhabitants of soils are important to ecosystem and planetary
functions, yet there are large gaps in our knowledge of their diversity and ecology. The …

Family-level sampling of mitochondrial genomes in Coleoptera: compositional heterogeneity and phylogenetics

MJTN Timmermans, C Barton, J Haran… - Genome Biology and …, 2016 - academic.oup.com
Mitochondrial genomes are readily sequenced with recent technology and thus evolutionary
lineages can be densely sampled. This permits better phylogenetic estimates and …

Soup to tree: the phylogeny of beetles inferred by mitochondrial metagenomics of a Bornean rainforest sample

A Crampton-Platt, MJTN Timmermans… - Molecular biology …, 2015 - academic.oup.com
In spite of the growth of molecular ecology, systematics and next-generation sequencing, the
discovery and analysis of diversity is not currently integrated with building the tree-of-life …

Phylogenomics illuminates the phylogeny of flower weevils (Curculioninae) and reveals ten independent origins of brood-site pollination mutualism in true weevils

J Haran, X Li, R Allio, S Shin… - … of the Royal …, 2023 - royalsocietypublishing.org
Weevils are an unusually species-rich group of phytophagous insects for which there is
increasing evidence of frequent involvement in brood-site pollination. This study examines …