Vertical characterisation of phylogenetic divergence of microbial community structures, interaction, and sustainability in estuary and marine ecosystems

OE Ohore, Y Wei, J Wang, Y Wang, BE Ifon… - Science of The Total …, 2022 - Elsevier
The changes in the aquatic environmental conditions often influence the microbial
community assemblages and genome repertoire. Studies investigating the aquatic diversity …

DNA metabarcoding focused on difficult‐to‐culture protists: An effective approach to clarify biological interactions

Y Nakamura, H Itagaki, A Tuji… - Environmental …, 2023 - Wiley Online Library
DNA metabarcoding on a single organism is a promising approach to clarify the biological
interactions (eg, predator–prey relationships and symbiosis, including parasitism) of difficult …

Taxonomic and abundance biases affect the record of marine eukaryotic plankton communities in sediment DNA archives

NL Nguyen, J Pawłowska… - Molecular Ecology …, 2024 - Wiley Online Library
Environmental DNA (e DNA) preserved in marine sediments is increasingly being used to
study past ecosystems. However, little is known about how accurately marine biodiversity is …

Metabarcoding reveals marked seasonality and a distinctive winter assemblage of dinoflagellates at a coastal LTER site in the Gulf of Naples

S Mordret, R Piredda, G Zampicinini… - Marine …, 2023 - Wiley Online Library
Dinoflagellates constitute an abundant and diversified component of marine plankton,
mostly associated with stratified conditions typical of late spring through autumn in …

The photic‐aphotic divide is a strong ecological and evolutionary force determining the distribution of ciliates (Alveolata, Ciliophora) in the ocean

LF Santoferrara, A Qureshi, A Sher… - Journal of Eukaryotic …, 2023 - Wiley Online Library
The bulk of knowledge on marine ciliates is from shallow and/or sunlit waters. We studied
ciliate diversity and distribution across epi‐and mesopelagic oceanic waters, using DNA …

DNA metabarcoding focusing on the plankton community: an effective approach to reconstruct the paleo-environment

Y Nakamura, E Ogiso-Tanaka, K Seto, T Ando… - Scientific Reports, 2023 - nature.com
Abstract DNA metabarcoding (DNA-MB) targeting the whole plankton community is a
promising approach in studies of sediment samples from water bodies, but its effectiveness …

Rhizaria in the oligotrophic ocean exhibit clear temporal and vertical variability

A Barth, L Blanco-Bercial, R Johnson… - Deep Sea Research Part I …, 2024 - Elsevier
Recently studies have shown that Rhizaria, a super-group of marine protists, have a large
role in pelagic ecosystems. They are unique in that they construct mineral tests out of silica …

Parasitic taxa are key to the vertical stratification and community variation of pelagic ciliates from the surface to the abyssopelagic zone

Y Wan, F Zhao, S Filker, A Hatmanti, R Zhao… - Environmental …, 2024 - Springer
Background An increase in upper-ocean thermal stratification is being observed worldwide
due to global warming. However, how ocean stratification affects the vertical profile of …

Exceptionally well-preserved radiolarian fossils within Miocene trace fossils from the Amatsu Formation, Chiba, Japan

A Kikukawa, Y Nakamura, K Kikuchi, N Furukawa… - Lethaia, 2024 - idunn.no
This study focuses on the siliceous microfossil preservation potential of trace fossils. To
understand this potential, we studied the trace fossil Tasselia ordamensis from the Middle to …

Illuminating the Twilight Zone: In-Situ Imaging Facilitates Discovery of Mesopelagic Plankton Dynamics and Community Structure

A Barth - 2024 - search.proquest.com
Ocean ecosystems provide both food and regulation of climate. Much of ocean ecosystem
functioning occurs through processes in the pelagic, where plankton are the dominant …