Tumor neoantigens: from basic research to clinical applications

T Jiang, T Shi, H Zhang, J Hu, Y Song, J Wei… - Journal of hematology & …, 2019 - Springer
Tumor neoantigen is the truly foreign protein and entirely absent from normal human
organs/tissues. It could be specifically recognized by neoantigen-specific T cell receptors …

MHC class II presentation in autoimmunity

IA Ishina, MY Zakharova, IN Kurbatskaia, AE Mamedov… - Cells, 2023 - mdpi.com
Antigen presentation by major histocompatibility complex class II (MHC-II) molecules is
crucial for eliciting an efficient immune response by CD4+ T cells and maintaining self …

Improved prediction of MHC II antigen presentation through integration and motif deconvolution of mass spectrometry MHC eluted ligand data

B Reynisson, C Barra, S Kaabinejadian… - Journal of proteome …, 2020 - ACS Publications
Major histocompatibility complex II (MHC II) molecules play a vital role in the onset and
control of cellular immunity. In a highly selective process, MHC II presents peptides derived …

[HTML][HTML] Defining HLA-II ligand processing and binding rules with mass spectrometry enhances cancer epitope prediction

JG Abelin, D Harjanto, M Malloy, P Suri, T Colson… - Immunity, 2019 - cell.com
Increasing evidence indicates CD4+ T cells can recognize cancer-specific antigens and
control tumor growth. However, it remains difficult to predict the antigens that will be …

[HTML][HTML] HLA Ligand Atlas: a benign reference of HLA-presented peptides to improve T-cell-based cancer immunotherapy

A Marcu, L Bichmann, L Kuchenbecker… - … for immunotherapy of …, 2021 - ncbi.nlm.nih.gov
Background The human leucocyte antigen (HLA) complex controls adaptive immunity by
presenting defined fractions of the intracellular and extracellular protein content to immune …

Class II MHC antigen processing in immune tolerance and inflammation

MM Jurewicz, LJ Stern - Immunogenetics, 2019 - Springer
Presentation of peptide antigens by MHC-II proteins is prerequisite to effective CD4 T cell
tolerance to self and to recognition of foreign antigens. Antigen uptake and processing …

Molecular determinants regulating the plasticity of the MHC class II immunopeptidome

L Santambrogio - Frontiers in Immunology, 2022 - frontiersin.org
In the last few years, advancement in the analysis of the MHC class II (MHC-II) ligandome in
several mouse and human haplotypes has increased our understanding of the molecular …

An integrated genomic, proteomic, and immunopeptidomic approach to discover treatment-induced neoantigens

N Olsson, ML Heberling, L Zhang… - Frontiers in …, 2021 - frontiersin.org
All nucleated mammalian cells express major histocompatibility complex (MHC) proteins
that present peptides on cell surfaces for immune surveillance. These MHC-presented …

Therapeutic vaccines targeting neoantigens to induce T-cell immunity against cancers

SC Pao, MT Chu, SI Hung - Pharmaceutics, 2022 - mdpi.com
Cancer immunotherapy has achieved multiple clinical benefits and has become an
indispensable component of cancer treatment. Targeting tumor-specific antigens, also …

Identification of MHC peptides using mass spectrometry for neoantigen discovery and cancer vaccine development

R Chen, KM Fulton, SM Twine… - Mass spectrometry reviews, 2021 - Wiley Online Library
Immunotherapy with neoantigens presented by major histocompatibility complex (MHC) is
one of the most promising approaches in cancer treatment. Using this approach, cancer …