Predation as a shaping force for the phenotypic and genotypic composition of planktonic bacteria

K Jürgens, C Matz - Antonie Van Leeuwenhoek, 2002 - Springer
Predation is a major mortality factor of planktonic bacteria and an important shaping force for
the phenotypic and taxonomic structure of bacterial communities. In this paper we:(1) …

An ecological perspective on bacterial biodiversity

MC Horner-Devine, KM Carney… - Proceedings of the …, 2004 - royalsocietypublishing.org
Bacteria may be one of the most abundant and species–rich groups of organisms, and they
mediate many critical ecosystem processes. Despite the ecological importance of bacteria …

Activity of abundant and rare bacteria in a coastal ocean

BJ Campbell, L Yu, JF Heidelberg… - Proceedings of the …, 2011 - National Acad Sciences
The surface layer of the oceans and other aquatic environments contains many bacteria that
range in activity, from dormant cells to those with high rates of metabolism. However, little …

Use of 16S rRNA and rpoB Genes as Molecular Markers for Microbial Ecology Studies

RJ Case, Y Boucher, I Dahllöf… - Applied and …, 2007 - Am Soc Microbiol
Several characteristics of the 16S rRNA gene, such as its essential function, ubiquity, and
evolutionary properties, have allowed it to become the most commonly used molecular …

Microbial community transcriptomes reveal microbes and metabolic pathways associated with dissolved organic matter turnover in the sea

J McCarren, JW Becker, DJ Repeta… - Proceedings of the …, 2010 - National Acad Sciences
Marine dissolved organic matter (DOM) contains as much carbon as the Earth's atmosphere,
and represents a critical component of the global carbon cycle. To better define microbial …

Microbial biogeography along an estuarine salinity gradient: combined influences of bacterial growth and residence time

BC Crump, CS Hopkinson, ML Sogin… - Applied and …, 2004 - Am Soc Microbiol
Shifts in bacterioplankton community composition along the salinity gradient of the Parker
River estuary and Plum Island Sound, in northeastern Massachusetts, were related to …

Single-virus genomics reveals hidden cosmopolitan and abundant viruses

F Martinez-Hernandez, O Fornas… - Nature …, 2017 - nature.com
Microbes drive ecosystems under constraints imposed by viruses. However, a lack of virus
genome information hinders our ability to answer fundamental, biological questions …

Changes in bacterioplankton composition under different phytoplankton regimens

J Pinhassi, MM Sala, H Havskum, F Peters… - Applied and …, 2004 - Am Soc Microbiol
The results of empirical studies have revealed links between phytoplankton and
bacterioplankton, such as the frequent correlation between chlorophyll a and bulk bacterial …

Evaluation of nested PCR–DGGE (denaturing gradient gel electrophoresis) with group-specific 16S rRNA primers for the analysis of bacterial communities from …

N Boon, W De Windt, W Verstraete… - FEMS microbiology …, 2002 - academic.oup.com
The diversity of bacterial groups of activated sludge samples that received wastewater from
four different types of industry was investigated by a nested PCR–DGGE (denaturing …

Effect of pesticides on soil microbial community

CC Lo - Journal of Environmental Science and Health Part B, 2010 - Taylor & Francis
According to guidelines for the approval of pesticides, information about effects of pesticides
on soil microorganisms and soil fertility are required, but the relationships of different …