Abstract Basic Local Alignment Search Tool (BLAST) is an essential algorithm that
researchers use for sequence alignment analysis. The National Center for Biotechnology …

With the development of peta-and exascale size computational systems there is growing
interest in running Big Data and Artificial Intelligence (AI) applications on them. Big Data and …

PCJ is a Java library for scalable high performance and computing and Big Data processing.
The library implements the partitioned global address space (PGAS) model. The PCJ …

Sorting algorithms are among the most commonly used algorithms in computer science and
modern software. Having efficient implementation of sorting is necessary for a wide …

In this paper, we present PCJ (Parallel Computing in Java), a novel tool for scalable high-
performance computing and big data processing in Java. PCJ is Java library implementing …

The paper shows the evaluation of various implementations of the sort algorithm on the
1000 Core Cluster at HPI Future SOC Lab. The implementations was done using PGAS …

Although Java is rarely used in HPC, there are a few notable libraries. Use of Java may help
to bridge the gap between HPC and big data processing. This paper compares the big data …

The paper shows the evaluation of some tests of the PCJ library on the 1000 Core Cluster at
HPI Future SOC Lab. The microbenchmarks and applications selected to test performance …

Sorting algorithms are among the most commonly used algorithms in computer science and
modern software. Having efficient implementation of sorting is necessary for a wide …

Recent years are associated with the increasing utilization of clusters, supercomputers, and
computer clouds. In addition to the computations based on the mathematical models, we …