An introduction to phylosymbiosis

SJ Lim, SR Bordenstein - Proceedings of the Royal …, 2020 - royalsocietypublishing.org
Phylosymbiosis was recently formulated to support a hypothesis-driven framework for the
characterization of a new, cross-system trend in host-associated microbiomes. Defining …

The evolution and genetics of virus host shifts

B Longdon, MA Brockhurst, CA Russell… - PLoS …, 2014 - journals.plos.org
Emerging viral diseases are often the product of a host shift, where a pathogen jumps from
its original host into a novel species. Phylogenetic studies show that host shifts are a …

Coral-associated bacteria demonstrate phylosymbiosis and cophylogeny

FJ Pollock, R McMinds, S Smith, DG Bourne… - Nature …, 2018 - nature.com
Scleractinian corals' microbial symbionts influence host health, yet how coral microbiomes
assembled over evolution is not well understood. We survey bacterial and archaeal …

Symbioses shape feeding niches and diversification across insects

CK Cornwallis, A van't Padje, J Ellers, M Klein… - Nature ecology & …, 2023 - nature.com
For over 300 million years, insects have relied on symbiotic microbes for nutrition and
defence. However, it is unclear whether specific ecological conditions have repeatedly …

phyr: An r package for phylogenetic species‐distribution modelling in ecological communities

D Li, R Dinnage, LA Nell, MR Helmus… - Methods in Ecology …, 2020 - Wiley Online Library
Abstract Model‐based approaches are increasingly popular in ecological studies. A good
example of this trend is the use of joint species distribution models to ask questions about …

[图书][B] Ecological statistics: contemporary theory and application

GA Fox, S Negrete-Yankelevich, VJ Sosa - 2015 - books.google.com
The application and interpretation of statistics are central to ecological study and practice.
Ecologists are now asking more sophisticated questions than in the past. These new …

The macroecology of infectious diseases: A new perspective on global‐scale drivers of pathogen distributions and impacts

PR Stephens, S Altizer, KF Smith… - Ecology …, 2016 - Wiley Online Library
Identifying drivers of infectious disease patterns and impacts at the broadest scales of
organisation is one of the most crucial challenges for modern science, yet answers to many …

Evolutionary history of plant hosts and fungal symbionts predicts the strength of mycorrhizal mutualism

JD Hoeksema, JD Bever, S Chakraborty… - Communications …, 2018 - nature.com
Most plants engage in symbioses with mycorrhizal fungi in soils and net consequences for
plants vary widely from mutualism to parasitism. However, we lack a synthetic understanding …

Towards a phylogenetic ecology of plant pests and pathogens

AV Gougherty, TJ Davies - Philosophical transactions of …, 2021 - royalsocietypublishing.org
Plant–pathogens and insect pests, hereafter pests, play an important role in structuring
ecological communities, yet both native and introduced pests impose significant pressure on …

A guided tour of phylogenetic comparative methods for studying trait evolution

CK Cornwallis, AS Griffin - Annual Review of Ecology, Evolution …, 2024 - annualreviews.org
Phylogenetic comparative methods are important tools in biology, providing insights into the
way traits evolve. There are many technical resources describing how these methods work …