Microbial metabolites in the marine carbon cycle

MA Moran, EB Kujawinski, WF Schroer, SA Amin… - Nature …, 2022 - nature.com
One-quarter of photosynthesis-derived carbon on Earth rapidly cycles through a set of short-
lived seawater metabolites that are generated from the activities of marine phytoplankton …

Progress and challenges in exploring aquatic microbial communities using non-targeted metabolomics

M Thukral, AE Allen, D Petras - The ISME Journal, 2023 - academic.oup.com
Advances in bioanalytical technologies are constantly expanding our insights into complex
ecosystems. Here, we highlight strategies and applications that make use of non-targeted …

Metabolic versatility of the nitrite-oxidizing bacterium Nitrospira marina and its proteomic response to oxygen-limited conditions

B Bayer, MA Saito, MR McIlvin, S Lücker… - The ISME …, 2021 - academic.oup.com
The genus Nitrospira is the most widespread group of nitrite-oxidizing bacteria and thrives in
diverse natural and engineered ecosystems. Nitrospira marina Nb-295T was isolated from …

How do quorum-sensing signals mediate algae–bacteria interactions?

L Dow - Microorganisms, 2021 - mdpi.com
Quorum sensing (QS) describes a process by which bacteria can sense the local cell density
of their own species, thus enabling them to coordinate gene expression and physiological …

Glycine betaine uptake and metabolism in marine microbial communities

AK Boysen, BP Durham, W Kumler… - Environmental …, 2022 - Wiley Online Library
Glycine betaine (GBT) is a compatible solute in high concentrations in marine
microorganisms. As a component of labile organic matter, GBT has complex biochemical …

Complex marine microbial communities partition metabolism of scarce resources over the diel cycle

D Muratore, AK Boysen, MJ Harke, KW Becker… - Nature Ecology & …, 2022 - nature.com
Complex assemblages of microbes in the surface ocean are responsible for approximately
half of global carbon fixation. The persistence of high taxonomic diversity despite …

Microbial metabolomic responses to changes in temperature and salinity along the western Antarctic Peninsula

HM Dawson, E Connors, NG Erazo, JS Sacks… - The ISME …, 2023 - academic.oup.com
Seasonal cycles within the marginal ice zones in polar regions include large shifts in
temperature and salinity that strongly influence microbial abundance and physiology …

Carbohydrates and carbohydrate degradation gene abundance and transcription in Atlantic waters of the Arctic

T Priest, S Vidal-Melgosa, JH Hehemann… - ISME …, 2023 - academic.oup.com
Carbohydrates are chemically and structurally diverse, represent a substantial fraction of
marine organic matter and are key substrates for heterotrophic microbes. Studies on …

Planktonic microbial signatures of sinking particle export in the open ocean's interior

F Li, A Burger, JM Eppley, KE Poff, DM Karl… - Nature …, 2023 - nature.com
A considerable amount of particulate carbon produced by oceanic photosynthesis is
exported to the deep-sea by the “gravitational pump”(~ 6.8 to 7.7 Pg C/year), sequestering it …

Illuminating the dark metabolome of Pseudo‐nitzschia–microbiome associations

I Koester, ZA Quinlan, LF Nothias… - Environmental …, 2022 - Wiley Online Library
The exchange of metabolites mediates algal and bacterial interactions that maintain
ecosystem function. Yet, while thousands of metabolites are produced, only a few molecules …