Engineering crops of the future: CRISPR approaches to develop climate-resilient and disease-resistant plants

SSA Zaidi, A Mahas, H Vanderschuren, MM Mahfouz - Genome biology, 2020 - Springer
To meet increasing global food demand, breeders and scientists aim to improve the yield
and quality of major food crops. Plant diseases threaten food security and are expected to …

Evolution and conservation of plant NLR functions

F Jacob, S Vernaldi, T Maekawa - Frontiers in immunology, 2013 - frontiersin.org
In plants and animals, nucleotide-binding domain and leucine-rich repeats (NLR)-containing
proteins play pivotal roles in innate immunity. Despite their similar biological functions and …

Large-scale analyses of angiosperm nucleotide-binding site-leucine-rich repeat genes reveal three anciently diverged classes with distinct evolutionary patterns

ZQ Shao, JY Xue, P Wu, YM Zhang, Y Wu… - Plant …, 2016 - academic.oup.com
Nucleotide-binding site-leucine-rich repeat (NBS-LRR) genes make up the largest plant
disease resistance gene family (R genes), with hundreds of copies occurring in individual …

Legume phylogeny and classification in the 21st century: progress, prospects and lessons for other species–rich clades

Legume Phylogeny Working Group, A Bruneau… - Taxon, 2013 - Wiley Online Library
The Leguminosae, the third–largest angiosperm family, has a global distribution and high
ecological and economic impor tance. We examine how the legume systematic research …

Copy number polymorphism in plant genomes

A Żmieńko, A Samelak, P Kozłowski… - Theoretical and applied …, 2014 - Springer
Copy number variants (CNVs) are genomic rearrangements resulting from gains or losses of
DNA segments. Typically, the term refers to rearrangements of sequences larger than 1 kb …

Structural variants in the soybean genome localize to clusters of biotic stress-response genes

LK McHale, WJ Haun, WW Xu, PB Bhaskar… - Plant …, 2012 - academic.oup.com
Genome-wide structural and gene content variations are hypothesized to drive important
phenotypic variation within a species. Structural and gene content variations were assessed …

Embracing heterogeneity: coalescing the Tree of Life and the future of phylogenomics

GA Bravo, A Antonelli, CD Bacon, K Bartoszek… - PeerJ, 2019 - peerj.com
ABSTRACT Building the Tree of Life (ToL) is a major challenge of modern biology, requiring
advances in cyberinfrastructure, data collection, theory, and more. Here, we argue that …

Long-term evolution of nucleotide-binding site-leucine-rich repeat genes: understanding gained from and beyond the legume family

ZQ Shao, YM Zhang, YY Hang, JY Xue… - Plant …, 2014 - academic.oup.com
Proper utilization of plant disease resistance genes requires a good understanding of their
short-and long-term evolution. Here we present a comprehensive study of the long-term …

Genome-wide comparative analyses reveal the dynamic evolution of nucleotide-binding leucine-rich repeat gene family among Solanaceae plants

E Seo, S Kim, SI Yeom, D Choi - Frontiers in plant science, 2016 - frontiersin.org
Plants have evolved an elaborate innate immune system against invading pathogens.
Within this system, intracellular nucleotide-binding leucine-rich repeat (NLR) immune …

Meta-analysis reveals consensus genomic regions associated with multiple disease resistance in wheat (Triticum aestivum L.)

DK Saini, A Chahal, N Pal, P Srivastava, PK Gupta - Molecular Breeding, 2022 - Springer
Abstract In wheat, meta-QTLs (MQTLs) and candidate genes (CGs) were identified for
multiple disease resistance (MDR). For this purpose, information was collected from 58 …