DrugCentral 2023 extends human clinical data and integrates veterinary drugs

S Avram, TB Wilson, R Curpan, L Halip… - Nucleic acids …, 2023 - academic.oup.com
DrugCentral monitors new drug approvals and standardizes drug information. The current
update contains 285 drugs (131 for human use). New additions include:(i) the integration of …

Enhancing phenotype recognition in clinical notes using large language models: PhenoBCBERT and PhenoGPT

J Yang, C Liu, W Deng, D Wu, C Weng, Y Zhou… - Patterns, 2024 - cell.com
To enhance phenotype recognition in clinical notes of genetic diseases, we developed two
models—PhenoBCBERT and PhenoGPT—for expanding the vocabularies of Human …

[HTML][HTML] Overview of the knowledge management center for illuminating the druggable genome

TI Oprea, C Bologa, J Holmes, S Mathias… - Drug Discovery …, 2024 - Elsevier
The Knowledge Management Center (KMC) for the Illuminating the Druggable Genome
(IDG) project aims to aggregate, update, and articulate protein-centric data knowledge for …

Clinical phenotypic spectrum of 4095 individuals with down syndrome from text mining of electronic health records

JM Havrilla, M Zhao, C Liu, C Weng, I Helbig, E Bhoj… - Genes, 2021 - mdpi.com
Human genetic disorders, such as Down syndrome, have a wide variety of clinical
phenotypic presentations, and characterizing each nuanced phenotype and subtype can be …

Termviewer–a web application for streamlined human phenotype ontology (hpo) tagging and document annotation

A Nixon, L Fang, JM Havrilla… - Chemistry & Biodiversity, 2022 - Wiley Online Library
Clinical notes from electronic health records (EHRs) contain a large amount of clinical
phenotype data on patients that can provide insights into the phenotypic presentation of …