Mechanisms of site-specific recombination

NDF Grindley, KL Whiteson, PA Rice - Annu. Rev. Biochem., 2006 - annualreviews.org
Integration, excision, and inversion of defined DNA segments commonly occur through site-
specific recombination, a process of DNA breakage and reunion that requires no DNA …

Cre recombinase and other tyrosine recombinases

G Meinke, A Bohm, J Hauber, MT Pisabarro… - Chemical …, 2016 - ACS Publications
Tyrosine-type site-specific recombinases (T-SSRs) have opened new avenues for the
predictable modification of genomes as they enable precise genome editing in heterologous …

Cre recombinase

GD Van Duyne - Mobile DNA III, 2015 - Wiley Online Library
The use of Cre recombinase to carry out conditional mutagenesis of transgenes and insert
DNA cassettes into eukaryotic chromosomes is widespread (1–9). Indeed, a PubMed search …

Single-molecule imaging of dynamic motions of biomolecules in DNA origami nanostructures using high-speed atomic force microscopy

M Endo, H Sugiyama - Accounts of chemical research, 2014 - ACS Publications
Conspectus Direct imaging of molecular motions is one of the most fundamental issues for
elucidating the physical properties of individual molecules and their reaction mechanisms …

[HTML][HTML] Dynamics in Cre-loxP site-specific recombination

MP Foster, MJ Benedek, TD Billings… - Current opinion in …, 2024 - Elsevier
Cre recombinase is a phage-derived enzyme that has found utility for precise manipulation
of DNA sequences. Cre recognizes and recombines pairs of loxP sequences characterized …

Orthogonal LoxPsym sites allow multiplexed site-specific recombination in prokaryotic and eukaryotic hosts

C Cautereels, J Smets, J De Saeger, L Cool… - Nature …, 2024 - nature.com
Site-specific recombinases such as the Cre-LoxP system are routinely used for genome
engineering in both prokaryotes and eukaryotes. Importantly, recombinases complement the …

Requirements for catalysis in the Cre recombinase active site

B Gibb, K Gupta, K Ghosh, R Sharp, J Chen… - Nucleic acids …, 2010 - academic.oup.com
Members of the tyrosine recombinase (YR) family of site-specific recombinases catalyze
DNA rearrangements using phosphoryl transfer chemistry that is identical to that used by the …

Challenging a paradigm: the role of DNA homology in tyrosine recombinase reactions

L Rajeev, K Malanowska… - … and Molecular Biology …, 2009 - Am Soc Microbiol
SUMMARY A classical feature of the tyrosine recombinase family of proteins catalyzing site-
specific recombination, as exemplified by the phage lambda integrase and the Cre and Flp …

A simple procedure to improve the surface passivation for single molecule fluorescence studies

H Pan, Y Xia, M Qin, Y Cao, W Wang - Physical biology, 2015 - iopscience.iop.org
The single-molecule fluorescence technique is becoming a general and mature tool to
probe interactions and dynamics of biomolecules with ultra high precision and accuracy …

DNA origami based visualization system for studying site-specific recombination events

Y Suzuki, M Endo, Y Katsuda, K Ou… - Journal of the …, 2014 - ACS Publications
Site-specific recombination involves reciprocal exchange between defined DNA sites. The
reaction initiates from the formation of a recombinase–DNA synaptic complex, in which two …