[HTML][HTML] Image harmonization: A review of statistical and deep learning methods for removing batch effects and evaluation metrics for effective harmonization

F Hu, AA Chen, H Horng, V Bashyam, C Davatzikos… - NeuroImage, 2023 - Elsevier
Magnetic resonance imaging and computed tomography from multiple batches (eg sites,
scanners, datasets, etc.) are increasingly used alongside complex downstream analyses to …

Noninvasive magnetic resonance imaging measures of glymphatic system activity

K Kamagata, Y Saito, C Andica… - Journal of Magnetic …, 2024 - Wiley Online Library
The comprehension of the glymphatic system, a postulated mechanism responsible for the
removal of interstitial solutes within the central nervous system (CNS), has witnessed …

A general primer for data harmonization

C Cheng, L Messerschmidt, I Bravo, M Waldbauer… - Scientific data, 2024 - nature.com
Data harmonization is an important method for combining or transforming data. To date
however, articles about data harmonization are field-specific and highly technical, making it …

[HTML][HTML] Harmonization of multi-site MRS data with ComBat

TK Bell, KJ Godfrey, AL Ware, KO Yeates, AD Harris - NeuroImage, 2022 - Elsevier
Magnetic resonance spectroscopy (MRS) is a non-invasive neuroimaging technique used to
measure brain chemistry in vivo and has been used to study the healthy brain as well as …

[HTML][HTML] Validation of cross-sectional and longitudinal ComBat harmonization methods for magnetic resonance imaging data on a travelling subject cohort

S Richter, S Winzeck, MM Correia… - Neuroimage …, 2022 - Elsevier
Background The growth in multi-center neuroimaging studies generated a need for methods
that mitigate the differences in hardware and acquisition protocols across sites ie, scanner …

Structural brain abnormalities in schizophrenia patients with a history and presence of auditory verbal hallucination

M Sone, D Koshiyama, Y Zhu, N Maikusa… - Translational …, 2022 - nature.com
Although many studies have demonstrated structural brain abnormalities associated with
auditory verbal hallucinations (AVH) in schizophrenia, the results remain inconsistent …

[HTML][HTML] A deep learning-based multisite neuroimage harmonization framework established with a traveling-subject dataset

D Tian, Z Zeng, X Sun, Q Tong, H Li, H He, JH Gao… - NeuroImage, 2022 - Elsevier
The accumulation of multisite large-sample MRI datasets collected during large brain
research projects in the last decade has provided critical resources for understanding the …

Disrupted network integration and segregation involving the default mode network in autism spectrum disorder

B Yang, M Wang, W Zhou, X Wang, S Chen… - Journal of Affective …, 2023 - Elsevier
Abstract Changes in the brain's default mode network (DMN) in the resting state are closely
related to autism spectrum disorder (ASD). Module segmentation can effectively elucidate …

Effects of MRI scanner manufacturers in classification tasks with deep learning models

R Kushol, P Parnianpour, AH Wilman, S Kalra… - Scientific Reports, 2023 - nature.com
Deep learning has become a leading subset of machine learning and has been successfully
employed in diverse areas, ranging from natural language processing to medical image …

Application of a machine learning algorithm for structural brain images in chronic schizophrenia to earlier clinical stages of psychosis and autism spectrum disorder: a …

Y Zhu, H Nakatani, W Yassin, N Maikusa… - Schizophrenia …, 2022 - academic.oup.com
Abstract Background and Hypothesis Machine learning approaches using structural
magnetic resonance imaging (MRI) can be informative for disease classification; however …