The Na+,K+-ATPase and its stoichiometric ratio: some thermodynamic speculations

RD Peluffo, JA Hernández - Biophysical Reviews, 2023 - Springer
Almost seventy years after its discovery, the sodium–potassium adenosine triphosphatase
(the sodium pump) located in the cell plasma membrane remains a source of novel …

Ultrafast excitonic dynamics in DNA: Bridging correlated quantum dynamics and sequence dependence

D Herb, M Rossini, J Ankerhold - Physical Review E, 2024 - APS
After photoexcitation of DNA, the excited electron (in the LUMO) and the remaining hole (in
the HOMO) localized on the same DNA base form a bound pair, called the Frenkel exciton …

Predicting the DNA conductance using a deep feedforward neural network model

A Aggarwal, V Vinayak, S Bag… - Journal of Chemical …, 2020 - ACS Publications
Double-stranded DNA (dsDNA) has been established as an efficient medium for charge
migration, bringing it to the forefront of the field of molecular electronics and biological …

Periodic, quasiperiodic, fractal, Kolakoski, and random binary polymers: Energy structure and carrier transport

K Lambropoulos, C Simserides - Physical Review E, 2019 - APS
We study periodic, quasiperiodic (Thue-Morse, Fibonacci, period doubling, Rudin-Shapiro),
fractal (Cantor, generalized Cantor), Kolakoski, and random binary sequences using a tight …

Effects of structural dynamics on charge carrier transfer in B-DNA: a combined MD and RT-TDDFT study

M Mantela, A Morphis, K Lambropoulos… - The Journal of …, 2021 - ACS Publications
Hole transfer along the axis of duplex DNA has been the focus of physical chemistry
research for decades, with implications in diverse fields, from nanotechnology to cell …

Spectral and transmission properties of periodic 1D tight-binding lattices with a generic unit cell: an analysis within the transfer matrix approach

K Lambropoulos, C Simserides - Journal of Physics …, 2018 - iopscience.iop.org
We report on the electronic structure, density of states and transmission properties of the
periodic one-dimensional tight-binding (TB) lattice with a single orbital per site and nearest …

Light-driven modulation of electrical current through DNA sequences: Engineering of a molecular optical switch

S Behnia, S Fathizadeh, E Javanshour… - The Journal of Physical …, 2020 - ACS Publications
Designing a molecular switch with bistable on/off states is of particular interest in molecular
electronics. Motivated by experimental studies of molecular conductors, interplays of …

RT-TDDFT study of hole oscillations in B-DNA monomers and dimers

M Tassi, A Morphis, K Lambropoulos… - Cogent Physics, 2017 - Taylor & Francis
Abstract We employ Real-Time Time-Dependent Density Functional Theory to study hole
oscillations within a B-DNA monomer (one base pair) or dimer (two base pairs). Placing the …

[HTML][HTML] Quasi-periodic and fractal polymers: Energy structure and carrier transfer

M Mantela, K Lambropoulos, M Theodorakou… - Materials, 2019 - mdpi.com
We study the energy structure and the coherent transfer of an extra electron or hole along
aperiodic polymers made of N monomers, with fixed boundaries, using B-DNA as our …

Frequency content of carrier oscillations along B-DNA polymers

K Lambropoulos, M Mantela… - 2017 Progress in …, 2017 - ieeexplore.ieee.org
We study the frequency content of an extra carrier oscillation along characteristic periodic B-
DNA polymers made of N monomers. We employ two variants of the Tight-Binding …