Implications of streamlining theory for microbial ecology

SJ Giovannoni, J Cameron Thrash… - The ISME …, 2014 - academic.oup.com
Whether a small cell, a small genome or a minimal set of chemical reactions with self-
replicating properties, simplicity is beguiling. As Leonardo da Vinci reportedly said,'simplicity …

Prochlorococcus: the structure and function of collective diversity

SJ Biller, PM Berube, D Lindell… - Nature Reviews …, 2015 - nature.com
The marine cyanobacterium Prochlorococcus is the smallest and most abundant
photosynthetic organism on Earth. In this Review, we summarize our understanding of the …

[HTML][HTML] Linking pangenomes and metagenomes: the Prochlorococcus metapangenome

TO Delmont, AM Eren - PeerJ, 2018 - peerj.com
Pangenomes offer detailed characterizations of core and accessory genes found in a set of
closely related microbial genomes, generally by clustering genes based on sequence …

Microbial structuring of marine ecosystems

F Azam, F Malfatti - Nature Reviews Microbiology, 2007 - nature.com
Despite the impressive advances that have been made in assessing the diversity of marine
microorganisms, the mechanisms that underlie the participation of microorganisms in marine …

The Sorcerer II Global Ocean Sampling Expedition: Northwest Atlantic through Eastern Tropical Pacific

DB Rusch, AL Halpern, G Sutton, KB Heidelberg… - PLoS …, 2007 - journals.plos.org
The world's oceans contain a complex mixture of micro-organisms that are for the most part,
uncharacterized both genetically and biochemically. We report here a metagenomic study of …

Marine bacterial, archaeal and protistan association networks reveal ecological linkages

JA Steele, PD Countway, L Xia, PD Vigil… - The ISME …, 2011 - academic.oup.com
Microbes have central roles in ocean food webs and global biogeochemical processes, yet
specific ecological relationships among these taxa are largely unknown. This is in part due …

Genetic effects of captive breeding cause a rapid, cumulative fitness decline in the wild

H Araki, B Cooper, MS Blouin - Science, 2007 - science.org
Captive breeding is used to supplement populations of many species that are declining in
the wild. The suitability of and long-term species survival from such programs remain largely …

Ecological genomics of marine picocyanobacteria

DJ Scanlan, M Ostrowski, S Mazard… - Microbiology and …, 2009 - Am Soc Microbiol
Marine picocyanobacteria of the genera Prochlorococcus and Synechococcus numerically
dominate the picophytoplankton of the world ocean, making a key contribution to global …

Genome divergence in two Prochlorococcus ecotypes reflects oceanic niche differentiation

G Rocap, FW Larimer, J Lamerdin, S Malfatti, P Chain… - Nature, 2003 - nature.com
The marine unicellular cyanobacterium Prochlorococcus is the smallest-known oxygen-
evolving autotroph. It numerically dominates the phytoplankton in the tropical and …

Niche Partitioning Among Prochlorococcus Ecotypes Along Ocean-Scale Environmental Gradients

ZI Johnson, ER Zinser, A Coe, NP McNulty… - Science, 2006 - science.org
Prochlorococcus is the numerically dominant phytoplankter in the oligotrophic oceans,
accounting for up to half of the photosynthetic biomass and production in some regions …