Co-evolution and co-speciation of host-gut bacteria systems

M Groussin, F Mazel, EJ Alm - Cell Host & Microbe, 2020 - cell.com
Mammalian gut microbiomes profoundly influence host fitness, but the processes that drive
the evolution of host-microbiome systems are poorly understood. Recent studies suggest …

The hologenome concept of evolution after 10 years

E Rosenberg, I Zilber-Rosenberg - Microbiome, 2018 - Springer
The holobiont (host with its endocellular and extracellular microbiome) can function as a
distinct biological entity, an additional organismal level to the ones previously considered …

Host biology in light of the microbiome: ten principles of holobionts and hologenomes

SR Bordenstein, KR Theis - PLoS biology, 2015 - journals.plos.org
Groundbreaking research on the universality and diversity of microorganisms is now
challenging the life sciences to upgrade fundamental theories that once seemed …

Phylosymbiosis: relationships and functional effects of microbial communities across host evolutionary history

AW Brooks, KD Kohl, RM Brucker, EJ van Opstal… - PLoS …, 2016 - journals.plos.org
Phylosymbiosis was recently proposed to describe the eco-evolutionary pattern, whereby
the ecological relatedness of host-associated microbial communities parallels the phylogeny …

An introduction to phylosymbiosis

SJ Lim, SR Bordenstein - Proceedings of the Royal …, 2020 - royalsocietypublishing.org
Phylosymbiosis was recently formulated to support a hypothesis-driven framework for the
characterization of a new, cross-system trend in host-associated microbiomes. Defining …

Gut microbiotas and host evolution: scaling up symbiosis

M Shapira - Trends in ecology & evolution, 2016 - cell.com
Our understanding of species evolution is undergoing restructuring. It is well accepted that
host–symbiont coevolution is responsible for fundamental aspects of biology. However, the …

Genome-wide association analysis identifies variation in vitamin D receptor and other host factors influencing the gut microbiota

J Wang, LB Thingholm, J Skiecevičienė, P Rausch… - Nature …, 2016 - nature.com
Human gut microbiota is an important determinant for health and disease, and recent
studies emphasize the numerous factors shaping its diversity. Here we performed a genome …

Microbes drive evolution of animals and plants: the hologenome concept

E Rosenberg, I Zilber-Rosenberg - MBio, 2016 - Am Soc Microbiol
The hologenome concept of evolution postulates that the holobiont (host plus symbionts)
with its hologenome (host genome plus microbiome) is a level of selection in evolution …

Host genetics and gut microbiome: challenges and perspectives

A Kurilshikov, C Wijmenga, J Fu, A Zhernakova - Trends in immunology, 2017 - cell.com
The mammalian gut is colonized by trillions of microorganisms collectively called the
microbiome. It is increasingly clear that this microbiome has a critical role of in many aspects …

Microbiomes as metacommunities: understanding host-associated microbes through metacommunity ecology

ET Miller, R Svanbäck, BJM Bohannan - Trends in Ecology & Evolution, 2018 - cell.com
Interest in host-associated microbiomes has skyrocketed recently, yet our ability to explain
microbiome variation has remained stubbornly low. Considering scales of interaction …