Plant DNA barcoding: from gene to genome

X Li, Y Yang, RJ Henry, M Rossetto, Y Wang… - Biological …, 2015 - Wiley Online Library
ABSTRACT DNA barcoding is currently a widely used and effective tool that enables rapid
and accurate identification of plant species; however, none of the available loci work across …

Telling plant species apart with DNA: from barcodes to genomes

PM Hollingsworth, DZ Li… - … Transactions of the …, 2016 - royalsocietypublishing.org
Land plants underpin a multitude of ecosystem functions, support human livelihoods and
represent a critically important component of terrestrial biodiversity—yet many tens of …

Thirteen Camelliachloroplast genome sequences determined by high-throughput sequencing: genome structure and phylogenetic relationships

H Huang, C Shi, Y Liu, SY Mao, LZ Gao - BMC Evolutionary biology, 2014 - Springer
Background Camellia is an economically and phylogenetically important genus in the family
Theaceae. Owing to numerous hybridization and polyploidization, it is taxonomically and …

Chloroplast DNA sequence utility for the lowest phylogenetic and phylogeographic inferences in angiosperms: the tortoise and the hare IV

J Shaw, HL Shafer, OR Leonard… - American Journal of …, 2014 - Wiley Online Library
• Premise of the study: Noncoding chloroplast DNA (NC‐cpDNA) sequences are the staple
data source of low‐level phylogeographic and phylogenetic studies of angiosperms. We …

Comparative chloroplast genome analysis of Citrus (Rutaceae) species: Insights into genomic characterization, phylogenetic relationships, and discrimination of …

W Shi, W Song, J Liu, C Shi, S Wang - Scientia Horticulturae, 2023 - Elsevier
Citrus species are fruit trees with great economic value worldwide and have been
domesticated and cultivated for several years. Although numerous phylogenetic taxonomy …

Strategies for complete plastid genome sequencing

AD Twyford, RW Ness - Molecular ecology resources, 2017 - Wiley Online Library
Plastid sequencing is an essential tool in the study of plant evolution. This high‐copy
organelle is one of the most technically accessible regions of the genome, and its sequence …

Phylogenomic relationships and species identification of the olive genus Olea (Oleaceae)

WP Dong, JH Sun, YL Liu, C Xu… - … of Systematics and …, 2022 - Wiley Online Library
The olive genus Olea includes c. 30–40 taxa in three subgenera (Olea, Tetrapilus, and
Paniculatae) within the family Oleaceae. Historically, the Olea genus was classified into four …

Evolution of Oryza chloroplast genomes promoted adaptation to diverse ecological habitats

LZ Gao, YL Liu, D Zhang, W Li, J Gao, Y Liu… - Communications …, 2019 - nature.com
The course, tempo and mode of chloroplast genome evolution remain largely unknown,
resulting in limited knowledge about how plant plastome gene and genome evolve during …

Analysis of six chloroplast genomes provides insight into the evolution of Chrysosplenium (Saxifragaceae)

Z Wu, R Liao, T Yang, X Dong, D Lan, R Qin, H Liu - BMC genomics, 2020 - Springer
Abstract Background Chrysosplenium L.(Saxifragaceae) is a genus of plants widely
distributed in Northern Hemisphere and usually found in moist, shaded valleys and …

The chloroplast genome sequence of bittersweet (Solanum dulcamara): Plastid genome structure evolution in Solanaceae

A Amiryousefi, J Hyvönen, P Poczai - PloS one, 2018 - journals.plos.org
Bittersweet (Solanum dulcamara) is a native Old World member of the nightshade family.
This European diploid species can be found from marshlands to high mountainous regions …