Mass spectrometry‐based protein–protein interaction networks for the study of human diseases

AL Richards, M Eckhardt, NJ Krogan - Molecular systems biology, 2021 - embopress.org
A better understanding of the molecular mechanisms underlying disease is key for
expediting the development of novel therapeutic interventions. Disease mechanisms are …

[图书][B] RNA, the epicenter of genetic information

J Mattick, P Amaral - 2023 - library.oapen.org
The origin story and emergence of molecular biology is muddled. The early triumphs in
bacterial genetics and the complexity of animal and plant genomes complicate an intricate …

MutaBind2: predicting the impacts of single and multiple mutations on protein-protein interactions

N Zhang, Y Chen, H Lu, F Zhao, RV Alvarez… - Iscience, 2020 - cell.com
Missense mutations may affect proteostasis by destabilizing or over-stabilizing protein
complexes and changing the pathway flux. Predicting the effects of stabilizing mutations on …

A comprehensive SARS-CoV-2–human protein–protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets

Y Zhou, Y Liu, S Gupta, MI Paramo, Y Hou, C Mao… - Nature …, 2023 - nature.com
Studying viral–host protein–protein interactions can facilitate the discovery of therapies for
viral infection. We use high-throughput yeast two-hybrid experiments and mass spectrometry …

A 3D structural SARS-CoV-2–human interactome to explore genetic and drug perturbations

SD Wierbowski, S Liang, Y Liu, Y Chen, S Gupta… - Nature …, 2021 - nature.com
Emergence of new viral agents is driven by evolution of interactions between viral proteins
and host targets. For instance, increased infectivity of SARS-CoV-2 compared to SARS-CoV …

Genetic basis of mitochondrial diseases

M Gusic, H Prokisch - FEBS letters, 2021 - Wiley Online Library
Mitochondrial disorders are monogenic disorders characterized by a defect in oxidative
phosphorylation and caused by pathogenic variants in one of over 340 different genes. The …

Non-adaptive complexity and biochemical function

L Schulz, FL Sendker, GKA Hochberg - Current Opinion in Structural …, 2022 - Elsevier
Intricate biochemical structures are usually thought to be useful, because natural selection
preserves them from degradation by a constant hail of destructive mutations. Biochemists …

Low concentration Tetrabromobisphenol A (TBBPA) elevating overall metabolism by inducing activation of the Ras signaling pathway

L Lu, J Hu, G Li, T An - Journal of Hazardous Materials, 2021 - Elsevier
Tetrabromobisphenol A (TBBPA), one of the most common flame retardants, affects
neurodevelopment, disrupts the endocrine system, and increases the possibility of …

Implications of disease-related mutations at protein–protein interfaces

D Xiong, D Lee, L Li, Q Zhao, H Yu - Current opinion in structural biology, 2022 - Elsevier
Protein–protein interfaces have been attracting great attention owing to their critical roles in
protein–protein interactions and the fact that human disease-related mutations are generally …

SAAMBE-3D: predicting effect of mutations on protein–protein interactions

S Pahari, G Li, AK Murthy, S Liang, R Fragoza… - International journal of …, 2020 - mdpi.com
Maintaining wild type protein–protein interactions is essential for the normal function of cell
and any mutation that alter their characteristics can cause disease. Therefore, the ability to …