Multi-atlas segmentation of biomedical images: a survey

JE Iglesias, MR Sabuncu - Medical image analysis, 2015 - Elsevier
Abstract Multi-atlas segmentation (MAS), first introduced and popularized by the pioneering
work of Rohlfing, et al.(2004), Klein, et al.(2005), and Heckemann, et al.(2006), is becoming …

Benchmark on automatic six-month-old infant brain segmentation algorithms: the iSeg-2017 challenge

L Wang, D Nie, G Li, É Puybareau… - IEEE transactions on …, 2019 - ieeexplore.ieee.org
Accurate segmentation of infant brain magnetic resonance (MR) images into white matter
(WM), gray matter (GM), and cerebrospinal fluid is an indispensable foundation for early …

A deep learning model for early prediction of Alzheimer's disease dementia based on hippocampal magnetic resonance imaging data

H Li, M Habes, DA Wolk, Y Fan… - Alzheimer's & …, 2019 - Elsevier
Introduction It is challenging at baseline to predict when and which individuals who meet
criteria for mild cognitive impairment (MCI) will ultimately progress to Alzheimer's disease …

Non-rigid image registration using self-supervised fully convolutional networks without training data

H Li, Y Fan - 2018 IEEE 15th International Symposium on …, 2018 - ieeexplore.ieee.org
A novel non-rigid image registration algorithm is built upon fully convolutional networks
(FCNs) to optimize and learn spatial transformations between pairs of images to be …

Automated segmentation of tissues using CT and MRI: a systematic review

L Lenchik, L Heacock, AA Weaver, RD Boutin… - Academic radiology, 2019 - Elsevier
Rationale and Objectives The automated segmentation of organs and tissues throughout the
body using computed tomography and magnetic resonance imaging has been rapidly …

Analysis of brain sub regions using optimization techniques and deep learning method in Alzheimer disease

D Chitradevi, S Prabha - Applied Soft Computing, 2020 - Elsevier
Automatic segmentation of brain sub regions such as White Matter (GM), Corpus Callosum
(CC), Grey Matter (WM) and Hippocampus (HC) is a challenging task due to the variations in …

Independent and reproducible hippocampal radiomic biomarkers for multisite Alzheimer's disease: diagnosis, longitudinal progress and biological basis

K Zhao, Y Ding, Y Han, Y Fan, AF Alexander-Bloch… - Science Bulletin, 2020 - Elsevier
Hippocampal morphological change is one of the main hallmarks of Alzheimer's disease
(AD). However, whether hippocampal radiomic features are robust as predictors of …

Multi-atlas segmentation with augmented features for cardiac MR images

W Bai, W Shi, C Ledig, D Rueckert - Medical image analysis, 2015 - Elsevier
Multi-atlas segmentation infers the target image segmentation by combining prior
anatomical knowledge encoded in multiple atlases. It has been quite successfully applied to …

Automatic kidney segmentation in ultrasound images using subsequent boundary distance regression and pixelwise classification networks

S Yin, Q Peng, H Li, Z Zhang, X You, K Fischer… - Medical image …, 2020 - Elsevier
It remains challenging to automatically segment kidneys in clinical ultrasound (US) images
due to the kidneys' varied shapes and image intensity distributions, although semi-automatic …

Non-rigid image registration using fully convolutional networks with deep self-supervision

H Li, Y Fan - arXiv preprint arXiv:1709.00799, 2017 - arxiv.org
We propose a novel non-rigid image registration algorithm that is built upon fully
convolutional networks (FCNs) to optimize and learn spatial transformations between pairs …