Latent antibiotic resistance genes are abundant, diverse, and mobile in human, animal, and environmental microbiomes

JS Inda-Díaz, D Lund, M Parras-Moltó, A Johnning… - Microbiome, 2023 - Springer
Background Bacterial communities in humans, animals, and the external environment
maintain a large collection of antibiotic resistance genes (ARGs). However, few of these …

Extensive screening reveals previously undiscovered aminoglycoside resistance genes in human pathogens

D Lund, RD Coertze, M Parras-Moltó… - Communications …, 2023 - nature.com
Antibiotic resistance is a growing threat to human health, caused in part by pathogens
accumulating antibiotic resistance genes (ARGs) through horizontal gene transfer. New …

PlantTribes2: Tools for comparative gene family analysis in plant genomics

EK Wafula, H Zhang, G Von Kuster… - Frontiers in Plant …, 2023 - frontiersin.org
Plant genome-scale resources are being generated at an increasing rate as sequencing
technologies continue to improve and raw data costs continue to fall; however, the cost of …

Large-scale characterization of the macrolide resistome reveals high diversity and several new pathogen-associated genes

D Lund, N Kieffer, M Parras-Moltó… - Microbial …, 2022 - microbiologyresearch.org
Macrolides are broad-spectrum antibiotics used to treat a range of infections. Resistance to
macrolides is often conferred by mobile resistance genes encoding Erm methyltransferases …

Unveiling root nodulation in Tribulus terrestris and Roystonea regia via metagenomics analysis

S Rahimlou, MS Hosseyni Moghadam, R Gazis… - Molecular Genetics and …, 2025 - Springer
Root nodule symbiosis is traditionally recognized in the Fabales, Fagales, Cucurbitales, and
Rosales orders within the Rosid I clade of angiosperms. However, ambiguous root nodule …

LoVis4u: Locus Visualisation tool for comparative genomics

AA Egorov, GC Atkinson - bioRxiv, 2024 - biorxiv.org
Comparative genomic analysis often involves visualisation of alignments of genomic loci.
While several software tools are available for this task, ranging from Python and R libraries …

Gain efficiency with streamlined and automated data processing: Examples from high-throughput monoclonal antibody production

M Kotowicz, S Fengler, B Kurkowsky, A Meyer-Berhorn… - bioRxiv, 2023 - biorxiv.org
Data management and sample tracking in complex biological workflows are essential steps
to ensure necessary documentation and guarantee the reusability of data and metadata …

The transfer of antibiotic resistance genes between evolutionary distant bacteria

M Parras-Moltó, D Lund, S Ebmeyer, DGJ Larsson… - bioRxiv, 2024 - biorxiv.org
Infections from antibiotic-resistant bacteria threaten human health globally. Resistance is
often caused by mobile antibiotic resistance genes (ARGs) shared horizontally between …

Large-scale screening of genomic data identifies novel mobile colistin resistance genes and reveals high over-representation in Pseudomonadota

A Schiller - 2023 - odr.chalmers.se
The emergence of antibiotic-resistant bacteria is a health problem of great concern.
Antibiotic resistance development is driven by selection pressure and the environment is …

[PDF][PDF] Investigation of diazotrophic bacteria association with plants

SR Barabi - 2022 - core.ac.uk
Nitrogen (N) is an integral component of key biomolecules (eg, chlorophyll, amino acids,
and nucleic acids), and its supply is crucial for plant growth and productivity in …