Guidance for laboratories performing molecular pathology for cancer patients

IA Cree, Z Deans, MJL Ligtenberg… - Journal of clinical …, 2014 - jcp.bmj.com
Molecular testing is becoming an important part of the diagnosis of any patient with cancer.
The challenge to laboratories is to meet this need, using reliable methods and processes to …

Epigenetic signatures in cancer: proper controls, current challenges and the potential for clinical translation

D Mancarella, C Plass - Genome medicine, 2021 - Springer
Epigenetic alterations are associated with normal biological processes such as aging or
differentiation. Changes in global epigenetic signatures, together with genetic alterations …

Molecular and Direct Detection Tests for Treponema pallidum Subspecies pallidum: A Review of the Literature, 1964–2017

ES Theel, SS Katz, A Pillay - Clinical infectious diseases, 2020 - academic.oup.com
Direct detection methods for Treponema pallidum include dark-field microscopy (DFM),
direct fluorescence antibody (DFA) testing, immunohistochemistry (IHC), and nucleic acid …

Performance evaluation of kits for bisulfite-conversion of DNA from tissues, cell lines, FFPE tissues, aspirates, lavages, effusions, plasma, serum, and urine

EE Holmes, M Jung, S Meller, A Leisse, V Sailer… - PloS one, 2014 - journals.plos.org
DNA methylation analyses usually require a preceding bisulfite conversion of the DNA. The
choice of an appropriate kit for a specific application should be based on the specific …

Targeted next generation sequencing as a reliable diagnostic assay for the detection of somatic mutations in tumours using minimal DNA amounts from formalin fixed …

WWJ de Leng, CG Gadellaa-van Hooijdonk… - PloS one, 2016 - journals.plos.org
Background Targeted Next Generation Sequencing (NGS) offers a way to implement testing
of multiple genetic aberrations in diagnostic pathology practice, which is necessary for …

Reliability and performance of commercial RNA and DNA extraction kits for FFPE tissue cores

PG Patel, S Selvarajah, KP Guérard, JMS Bartlett… - PloS one, 2017 - journals.plos.org
Cancer biomarker studies often require nucleic acid extraction from limited amounts of
formalin-fixed, paraffin-embedded (FFPE) tissues, such as histologic sections or needle …

[HTML][HTML] PD-L1 promoter methylation is a prognostic biomarker for biochemical recurrence-free survival in prostate cancer patients following radical prostatectomy

H Gevensleben, EE Holmes, D Goltz, J Dietrich… - Oncotarget, 2016 - ncbi.nlm.nih.gov
Background The rapid development of programmed death 1 (PD-1)/programmed death
ligand 1 (PD-L1) inhibitors has generated an urgent need for biomarkers assisting the …

Molecular Tools for Detection and Identification of Paracoccidioides Species: Current Status and Future Perspectives

BG Pinheiro, RC Hahn, ZP Camargo, AM Rodrigues - Journal of fungi, 2020 - mdpi.com
Paracoccidioidomycosis (PCM) is a mycotic disease caused by the Paracoccidioides
species, a group of thermally dimorphic fungi that grow in mycelial form at 25° C and as …

Digital PCR: A Sensitive and Precise Method for KIT D816V Quantification in Mastocytosis

G Greiner, M Gurbisz, F Ratzinger… - Clinical …, 2018 - academic.oup.com
BACKGROUND The analytically sensitive detection of KIT D816V in blood and bone marrow
is important for diagnosing systemic mastocytosis (SM). Additionally, precise quantification …

Balamuthia mandrillaris infection in China: a retrospective report of 28 cases

L Wang, W Cheng, B Li, Z Jian, X Qi, D Sun… - Emerging Microbes & …, 2020 - Taylor & Francis
Balamuthia mandrillaris infection is a rare and fatal disease. We have recorded 28 cases of
Balamuthia mandrillaris infection during the past 20 years. Eighteen patients (64%) were …