DNN-DTIs: Improved drug-target interactions prediction using XGBoost feature selection and deep neural network

C Chen, H Shi, Z Jiang, A Salhi, R Chen, X Cui… - Computers in Biology …, 2021 - Elsevier
Abstract Analysis and prediction of drug-target interactions (DTIs) play an important role in
understanding drug mechanisms, as well as drug repositioning and design. Machine …

Protein encoder: An autoencoder-based ensemble feature selection scheme to predict protein secondary structure

U Manzoor, Z Halim - Expert Systems with Applications, 2023 - Elsevier
Proteins play a vital role in the human body as they perform important metabolic tasks.
Experimental identification of protein structure is expensive and time consuming. The …

DLBLS_SS: protein secondary structure prediction using deep learning and broad learning system

L Yuan, X Hu, Y Ma, Y Liu - RSC advances, 2022 - pubs.rsc.org
Protein secondary structure prediction (PSSP) is not only beneficial to the study of protein
structure and function but also to the development of drugs. As a challenging task in …

Protein secondary structure prediction using data-partitioning combined with stacked convolutional neural networks and bidirectional gated recurrent units

MA Sofi, MA Wani - International Journal of Information Technology, 2022 - Springer
Protein secondary structure prediction (PSSP) is one of the challenging tasks in
computational biology. Deep neural networks have significantly improved the accuracy of …

IGPRED: Combination of convolutional neural and graph convolutional networks for protein secondary structure prediction

Y Görmez, M Sabzekar, Z Aydın - Proteins: Structure, Function …, 2021 - Wiley Online Library
There is a close relationship between the tertiary structure and the function of a protein. One
of the important steps to determine the tertiary structure is protein secondary structure …

Protein secondary structure prediction using a lightweight convolutional network and label distribution aware margin loss

W Yang, Z Hu, L Zhou, Y Jin - Knowledge-Based Systems, 2022 - Elsevier
Protein secondary structure prediction (PSSP) is an important task in computational
molecular biology. Recently, deep neural networks have demonstrated great potential in …

Protein secondary structure prediction using cascaded feature learning model

S Geethu, ER Vimina - Applied Soft Computing, 2023 - Elsevier
The protein secondary structure prediction (PSSP) is pivotal for predicting tertiary structure,
which is proliferating in demand for drug design and development. Further, it can be used to …

[PDF][PDF] Integrating artificial intelligence in disease diagnosis, treatment, and formulation development: a review

D Kumar, P Kumar, I Ahmed, S Singh - Asian J Pharm Clin Res, 2023 - researchgate.net
Artificial intelligence (AI) is rapidly advancing and significantly impacting clinical care and
treatment. Machine learning and deep learning, as core digital AI technologies, are being …

Ensemble deep learning models for protein secondary structure prediction using bidirectional temporal convolution and bidirectional long short-term memory

L Yuan, Y Ma, Y Liu - Frontiers in Bioengineering and Biotechnology, 2023 - frontiersin.org
Protein secondary structure prediction (PSSP) is a challenging task in computational
biology. However, existing models with deep architectures are not sufficient and …

IGPRED-MultiTask: a deep learning model to predict protein secondary structure, torsion angles and solvent accessibility

Y Görmez, Z Aydin - IEEE/ACM Transactions on Computational …, 2022 - ieeexplore.ieee.org
Protein secondary structure, solvent accessibility and torsion angle predictions are
preliminary steps to predict 3D structure of a protein. Deep learning approaches have …