New Insights into the Cooperativity and Dynamics of Dimeric Enzymes

KW Chen, TY Sun, YD Wu - Chemical Reviews, 2023 - ACS Publications
A survey of protein databases indicates that the majority of enzymes exist in oligomeric
forms, with about half of those found in the UniProt database being homodimeric …

Stabilization of multimeric enzymes: Strategies to prevent subunit dissociation

R Fernandez-Lafuente - Enzyme and microbial technology, 2009 - Elsevier
The moderate stability of enzymes is one of the main drawbacks that hinder general
implementation of these interesting biocatalysts at industrial scale. An especially complex …

Computational design of affinity and specificity at protein–protein interfaces

J Karanicolas, B Kuhlman - Current opinion in structural biology, 2009 - Elsevier
The computer-based design of protein–protein interactions is a rigorous test of our
understanding of molecular recognition and an attractive approach for creating novel tools …

Dextran aldehyde in biocatalysis: More than a mere immobilization system

VG Tacias-Pascacio, C Ortiz, N Rueda… - Catalysts, 2019 - mdpi.com
Dextran aldehyde (dexOx), resulting from the periodate oxidative cleavage of 1, 2-diol
moiety inside dextran, is a polymer that is very useful in many areas, including as a …

Stabilization of the hexameric glutamate dehydrogenase from Escherichia coli by cations and polyethyleneimine

C Garcia-Galan, O Barbosa… - Enzyme and microbial …, 2013 - Elsevier
The enzyme glutamate dehydrogenase (GDH) from Escherichia coli is a hexameric protein.
The stability of this enzyme was increased in the presence of Li+ in concentrations ranging …

A guide to the effects of a large portion of the residues of triosephosphate isomerase on catalysis, stability, druggability, and human disease

V Olivares‐Illana, H Riveros‐Rosas… - Proteins: Structure …, 2017 - Wiley Online Library
Triosephosphate isomerase (TIM) is a ubiquitous enzyme, which appeared early in
evolution. TIM is responsible for obtaining net ATP from glycolysis and producing an extra …

[HTML][HTML] Triosephosphate isomerase I170V alters catalytic site, enhances stability and induces pathology in a Drosophila model of TPI deficiency

BP Roland, CG Amrich, CJ Kammerer… - … et Biophysica Acta (BBA …, 2015 - Elsevier
Triosephosphate isomerase (TPI) is a glycolytic enzyme which homodimerizes for full
catalytic activity. Mutations of the TPI gene elicit a disease known as TPI Deficiency, a …

De novo design of triosephosphate isomerases using generative language models

S Romero-Romero, AE Braun, T Kossendey, N Ferruz… - bioRxiv, 2024 - biorxiv.org
The design of proteins with tailored functions is of immense interest to biotechnology,
medicine, and the chemical industry. While protein design is rapidly evolving with the use of …

Substrate-Induced Dimerization of Engineered Monomeric Variants of Triosephosphate Isomerase from Trichomonas vaginalis

S Lara-Gonzalez, P Estrella, C Portillo, ME Cruces… - PloS one, 2015 - journals.plos.org
The dimeric nature of triosephosphate isomerases (TIMs) is maintained by an extensive
surface area interface of more than 1600 Å2. TIMs from Trichomonas vaginalis (TvTIM) are …

Structural, thermodynamic and catalytic characterization of an ancestral triosephosphate isomerase reveal early evolutionary coupling between monomer association …

M Schulte‐Sasse, F Pardo‐Ávila… - The FEBS …, 2019 - Wiley Online Library
Function, structure, and stability are strongly coupled in obligated oligomers, such as
triosephosphate isomerase (TIM). However, little is known about how this coupling evolved …