Copy number variation in domestication

ZN Lye, MD Purugganan - Trends in Plant Science, 2019 - cell.com
Domesticated plants have long served as excellent models for studying evolution. Many
genes and mutations underlying important domestication traits have been identified, and …

Demographic history, selection and functional diversity of the canine genome

EA Ostrander, RK Wayne, AH Freedman… - Nature Reviews …, 2017 - nature.com
The domestic dog represents one of the most dramatic long-term evolutionary experiments
undertaken by humans. From a large wolf-like progenitor, unparalleled diversity in …

Genome sequencing of 2000 canids by the Dog10K consortium advances the understanding of demography, genome function and architecture

JRS Meadows, JM Kidd, GD Wang, HG Parker… - Genome biology, 2023 - Springer
Abstract Background The international Dog10K project aims to sequence and analyze
several thousand canine genomes. Incorporating 20× data from 1987 individuals, including …

Ancient European dog genomes reveal continuity since the Early Neolithic

LR Botigué, S Song, A Scheu, S Gopalan… - Nature …, 2017 - nature.com
Europe has played a major role in dog evolution, harbouring the oldest uncontested
Palaeolithic remains and having been the centre of modern dog breed creation. Here we …

Control of fire in the Paleolithic: evaluating the cooking hypothesis

R Wrangham - Current Anthropology, 2017 - journals.uchicago.edu
According to current evidence, Homo sapiens was unable to survive on a diet of raw wild
foods. Because cooked diets have large physiological and behavioral consequences, a …

Independent amylase gene copy number bursts correlate with dietary preferences in mammals

P Pajic, P Pavlidis, K Dean, L Neznanova, RA Romano… - Elife, 2019 - elifesciences.org
The amylase gene (AMY), which codes for a starch-digesting enzyme in animals, underwent
several gene copy number gains in humans (Perry et al., 2007), dogs (Axelsson et al …

Effects of domestication on the gut microbiota parallel those of human industrialization

AT Reese, KS Chadaideh, CE Diggins, LD Schell… - elife, 2021 - elifesciences.org
Domesticated animals experienced profound changes in diet, environment, and social
interactions that likely shaped their gut microbiota and were potentially analogous to …

Precision (personalized) nutrition: understanding metabolic heterogeneity

SH Zeisel - Annual review of food science and technology, 2020 - annualreviews.org
People differ in their requirements for and responses to nutrients and bioactive molecules in
the diet. Many inputs contribute to metabolic heterogeneity (including variations in genetics …

Signatures of human-commensalism in the house sparrow genome

M Ravinet, TO Elgvin, C Trier… - … of the Royal …, 2018 - royalsocietypublishing.org
House sparrows (Passer domesticus) are a hugely successful anthrodependent species;
occurring on nearly every continent. Yet, despite their ubiquity and familiarity to humans …

[HTML][HTML] Valuing the diversity of research methods to advance nutrition science

RD Mattes, SB Rowe, SD Ohlhorst, AW Brown… - Advances in …, 2022 - Elsevier
ABSTRACT The ASN Board of Directors appointed the Nutrition Research Task Force to
develop a report on scientific methods used in nutrition science to advance discovery …