Viruses of archaea: structural, functional, environmental and evolutionary genomics

M Krupovic, V Cvirkaite-Krupovic, J Iranzo… - Virus research, 2018 - Elsevier
Viruses of archaea represent one of the most enigmatic parts of the virosphere. Most of the
characterized archaeal viruses infect extremophilic hosts and display remarkable diversity of …

The interplay between nucleoid organization and transcription in archaeal genomes

E Peeters, RPC Driessen, F Werner… - Nature Reviews …, 2015 - nature.com
The archaeal genome is organized by either eukaryotic-like histone proteins or bacterial-like
nucleoid-associated proteins. Recent studies have revealed novel insights into chromatin …

The biology of thermoacidophilic archaea from the order Sulfolobales

AM Lewis, A Recalde, C Bräsen… - FEMS Microbiology …, 2021 - academic.oup.com
Thermoacidophilic archaea belonging to the order Sulfolobales thrive in extreme biotopes,
such as sulfuric hot springs and ore deposits. These microorganisms have been model …

Transcription regulators in Archaea: homologies and differences with bacterial regulators

L Lemmens, HR Maklad, I Bervoets… - Journal of molecular …, 2019 - Elsevier
The fitness and survival of prokaryotic microorganisms depends on their ability to
adequately respond to environmental changes, sudden stress conditions and metabolic …

TroR is the primary regulator of the iron homeostasis transcription network in the halophilic archaeon Haloferax volcanii

M Martinez Pastor, S Sakrikar, S Hwang… - Nucleic Acids …, 2024 - academic.oup.com
Maintaining the intracellular iron concentration within the homeostatic range is vital to meet
cellular metabolic needs and reduce oxidative stress. Previous research revealed that the …

A TetR-family transcription factor regulates fatty acid metabolism in the archaeal model organism Sulfolobus acidocaldarius

K Wang, D Sybers, HR Maklad, L Lemmens… - Nature …, 2019 - nature.com
Fatty acid metabolism and its regulation are known to play important roles in bacteria and
eukaryotes. By contrast, although certain archaea appear to metabolize fatty acids, the …

Promoter-proximal elongation regulates transcription in archaea

F Blombach, T Fouqueau, D Matelska… - Nature …, 2021 - nature.com
Recruitment of RNA polymerase and initiation factors to the promoter is the only known
target for transcription activation and repression in archaea. Whether any of the subsequent …

Transcriptional regulation in archaea: from individual genes to global regulatory networks

M Martinez-Pastor, PD Tonner… - Annual review of …, 2017 - annualreviews.org
Archaea are major contributors to biogeochemical cycles, possess unique metabolic
capabilities, and resist extreme stress. To regulate the expression of genes encoding these …

Evolution of regulated transcription

OV Bylino, AN Ibragimov, YV Shidlovskii - Cells, 2020 - mdpi.com
The genomes of all organisms abound with various cis-regulatory elements, which control
gene activity. Transcriptional enhancers are a key group of such elements in eukaryotes and …

A regulatory hierarchy controls the dynamic transcriptional response to extreme oxidative stress in archaea

PD Tonner, AMC Pittman, JG Gulli, K Sharma… - PLoS …, 2015 - journals.plos.org
Networks of interacting transcription factors are central to the regulation of cellular
responses to abiotic stress. Although the architecture of many such networks has been …