[HTML][HTML] Pseudomonas putida as a functional chassis for industrial biocatalysis: from native biochemistry to trans-metabolism

PI Nikel, V de Lorenzo - Metabolic engineering, 2018 - Elsevier
The itinerary followed by Pseudomonas putida from being a soil-dweller and plant colonizer
bacterium to become a flexible and engineer-able platform for metabolic engineering stems …

Recent advances in petroleum microbiology

JD Van Hamme, A Singh, OP Ward - Microbiology and molecular …, 2003 - Am Soc Microbiol
Recent advances in molecular biology have extended our understanding of the metabolic
processes related to microbial transformation of petroleum hydrocarbons. The physiological …

Degradation of alkanes by bacteria

F Rojo - Environmental microbiology, 2009 - Wiley Online Library
Pollution of soil and water environments by crude oil has been, and is still today, an
important problem. Crude oil is a complex mixture of thousands of compounds. Among them …

The interaction between plants and bacteria in the remediation of petroleum hydrocarbons: an environmental perspective

P Gkorezis, M Daghio, A Franzetti… - Frontiers in …, 2016 - frontiersin.org
Widespread pollution of terrestrial ecosystems with petroleum hydrocarbons (PHCs) has
generated a need for remediation and, given that many PHCs are biodegradable, bio-and …

Carbon catabolite repression in Pseudomonas: optimizing metabolic versatility and interactions with the environment

F Rojo - FEMS microbiology reviews, 2010 - academic.oup.com
Metabolically versatile free-living bacteria have global regulation systems that allow cells to
selectively assimilate a preferred compound among a mixture of several potential carbon …

STAND, a class of P-loop NTPases including animal and plant regulators of programmed cell death: multiple, complex domain architectures, unusual phyletic patterns …

DD Leipe, EV Koonin, L Aravind - Journal of molecular biology, 2004 - Elsevier
Using sequence profile analysis and sequence-based structure predictions, we define a
previously unrecognized, widespread class of P-loop NTPases. The signal transduction …

Biodegradation of Aromatic Compounds byEscherichia coli

E Dı́az, A Ferrández, MA Prieto… - … and Molecular Biology …, 2001 - Am Soc Microbiol
Although Escherichia coli has long been recognized as the best-understood living organism,
little was known about its abilities to use aromatic compounds as sole carbon and energy …

Solvent-tolerant bacteria for biotransformations in two-phase fermentation systems

HJ Heipieper, G Neumann, S Cornelissen… - Applied microbiology …, 2007 - Springer
Product removal from aqueous media poses a challenge in biotechnological whole-cell
biotransformation processes in which substrates and/or products may have toxic effects. The …

Enzymes and genes involved in aerobic alkane degradation

W Wang, Z Shao - Frontiers in microbiology, 2013 - frontiersin.org
Alkanes are major constituents of crude oil. They are also present at low concentrations in
diverse non-contaminated because many living organisms produce them as chemo …

Analysis of Pseudomonas putida alkane-degradation gene clusters and flanking insertion sequences: evolution and regulation of the alk genes

JB van Beilen, S Panke, S Lucchini… - …, 2001 - microbiologyresearch.org
The Pseudomonas putida GPo1 (commonly known as Pseudomonas oleovorans GPo1)
alkBFGHJKL and alkST gene clusters, which encode proteins involved in the conversion of …